RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SNRNP200O75643 2136 aaKnown RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 FKBP9O95302 570 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ZIC2O95409 532 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ONECUT2O95948 504 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 AHSGP02765 367 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 MPC1LP0DKB6 136 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ERGP11308 486 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 NAT1P18440 290 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 AGXTP21549 392 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 PSMB5P28074 263 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 SLC1A2P43004 574 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 DCDP81605 110 aaKnown RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 MPP1Q00013 466 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 IFT88Q13099 833 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 IL10RAQ13651 578 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 SSPNQ14714 243 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 C1orf189Q5VU69 101 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ZNF470Q6ECI4 717 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 TCTN3Q6NUS6 607 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 HIBCHQ6NVY1 386 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 FAM198BQ6UWH4 519 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 NEK10Q6ZWH5 1172 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 LMNTD2Q8IXW0 634 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 C2CD4AQ8NCU7 369 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 C9orf43Q8TAL5 461 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 CALML6Q8TD86 181 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 SEC14L1Q92503 715 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 PMM1Q92871 262 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ZNF285Q96NJ3 590 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 GPR21Q99679 349 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 NAPGQ99747 312 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 DPH2Q9BQC3 489 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 AARSD1Q9BTE6 412 aaKnown RBP8.97□□□□□ -0.97
HDAC3-215ENST00000519474 SLC7A5P2Q9GIP4 190 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ENAMQ9NRM1 1142 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ASIC3Q9UHC3 531 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 KLK4Q9Y5K2 254 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 MRFAP1Q9Y605 127 aa8.97□□□□□ -0.97
HDAC3-215ENST00000519474 ATRXP46100 2492 aa8.96□□□□□ -0.97
HDAC3-215ENST00000519474 MED13Q9UHV7 2174 aa8.96□□□□□ -0.97
HDAC3-215ENST00000519474 LOC105369274A0A096LPK9 316 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 LOC102723532A0A0G2JNH3 316 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MYO1CO00159 1063 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ZSCAN9O15535 394 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 TTI1O43156 1089 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SRPX2O60687 465 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 DNAJB5O75953 348 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 PDGFAP04085 211 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 PGAM1P18669 254 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 NR1D1P20393 614 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ITGAXP20702 1163 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ALAS2P22557 587 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MCM3P25205 808 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ELK3P41970 407 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 CARSP49589 748 aaKnown RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 CCL11P51671 97 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 PMS2P54278 862 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 CBLBQ13191 982 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 CRYMQ14894 314 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ARHGAP19Q14CB8 494 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 BBS9Q3SYG4 887 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 NKAIN1Q4KMZ8 207 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ZC3H12BQ5HYM0 836 aaKnown RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SPANXN3Q5MJ09 141 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 WASHC2DQ5SRD0 308 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 TEDDM1Q5T9Z0 273 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 FRMPD2BQ6IN97 320 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MRPL14Q6P1L8 145 aaKnown RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SUSD1Q6UWL2 747 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SYDE1Q6ZW31 735 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 KCNMB4Q86W47 210 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 LRRC56Q8IYG6 542 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 OR4N4Q8N0Y3 316 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 FBXO15Q8NCQ5 510 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 OR2L3Q8NG85 312 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 EEF1AKMT1Q8WVE0 214 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 DLG3Q92796 817 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 KCNJ9Q92806 393 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MIPEPQ99797 713 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ACAT2Q9BWD1 397 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 RAB11FIP5Q9BXF6 653 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 ING2Q9H160 280 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 INTS7Q9NVH2 962 aaKnown RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SPATA7Q9P0W8 599 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 RNF14Q9UBS8 474 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 TP53TG5Q9Y2B4 290 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 MAN2B2Q9Y2E5 1009 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 HEMK1Q9Y5R4 338 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-215ENST00000519474 TEX264Q9Y6I9 313 aa8.96□□□□□ -0.98
HDAC3-215ENST00000519474 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
HDAC3-215ENST00000519474 IGKV1-8A0A0C4DH67 115 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 A0A0J9YVX5 310 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 OR2A25A4D2G3 310 aa8.95□□□□□ -0.98
HDAC3-215ENST00000519474 FITM1A5D6W6 292 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms