RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 GPD1LQ8N335 351 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 AFAP1Q8N556 730 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 POC5Q8NA72 575 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 C11orf45Q8TAV5 145 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 LRRC15Q8TF66 581 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 SLC22A18Q96BI1 424 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 PDLIM5Q96HC4 596 aaKnown RBP2.08□□□□□ -2.08
PCM1-208ENST00000518877 SLC45A3Q96JT2 553 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 CNOT6LQ96LI5 555 aaKnown RBP2.08□□□□□ -2.08
PCM1-208ENST00000518877 NECTIN4Q96NY8 510 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 BTBD10Q9BSF8 475 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 LMF2Q9BU23 707 aaKnown RBP2.08□□□□□ -2.08
PCM1-208ENST00000518877 NUP85Q9BW27 656 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 FGF21Q9NSA1 209 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 HAUS2Q9NVX0 235 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 TEX10Q9NXF1 929 aaPredicted RBP2.08□□□□□ -2.08
PCM1-208ENST00000518877 CACNG4Q9UBN1 327 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 POMT2Q9UKY4 750 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 PCDHGB4Q9UN71 923 aa2.08□□□□□ -2.08
PCM1-208ENST00000518877 GPR75-ASB3A0A0A6YYF3 556 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 A0A1W2PPM1 405 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 hCG_1807616A0A1W2PRN6 198 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 ANKRD61A6NGH8 418 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 PI4K2BG5E9Z4 385 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 ZBED4O75132 1171 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 HSPA8P11142 646 aaKnown RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 PORP16435 677 aaPredicted RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 JAK1P23458 1154 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 PDX1P52945 283 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 MAZP56270 477 aaKnown RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 SIRPAP78324 504 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 LMOD3Q0VAK6 560 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 TAF10Q12962 218 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 AIMP2Q13155 320 aaKnown RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 MTF1Q14872 753 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 TNIP1Q15025 636 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 HERC3Q15034 1050 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 CA9Q16790 459 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 MTHFSDQ2M296 383 aaKnown RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 KRT79Q5XKE5 535 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 TMEM64Q6YI46 380 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 KIF6Q6ZMV9 814 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 COMMD2Q86X83 199 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 ZBED8Q8IZ13 594 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 EID3Q8N140 333 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 MAPK15Q8TD08 544 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 TOMM40LQ969M1 308 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 C1orf147Q96MC9 270 aaPredicted RBP2.07□□□□□ -2.08
PCM1-208ENST00000518877 CCDC3Q9BQI4 270 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 ZNF577Q9BSK1 485 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 KIFC3Q9BVG8 833 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 OR2B2Q9GZK3 357 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 THAP2Q9H0W7 228 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 MED20Q9H944 212 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 SLC35C2Q9NQQ7 365 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 NDE1Q9NXR1 346 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 OR6C2Q9NZP2 312 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 NYAP2Q9P242 653 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 B4GALT7Q9UBV7 327 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 ZNF541Q9H0D2 1346 aa2.07□□□□□ -2.08
PCM1-208ENST00000518877 A8MV72 311 aaPredicted RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 PRAMEF11O60813 436 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 AVILO75366 819 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 SEC24AO95486 1093 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 HOXD4P09016 255 aaPredicted RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 OR2T7P0C7T2 308 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 CSH1P0DML2 217 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 CSH2P0DML3 217 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 VPREB1P12018 145 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 DARSP14868 501 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 CD27P26842 260 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 ZFP36L2P47974 494 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 MAT1AQ00266 395 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 POU5F1Q01860 360 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 CD300CQ08708 224 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 PLEKHS1Q5SXH7 462 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 CATSPERDQ86XM0 798 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 OR6S1Q8NH40 331 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 OR52N5Q8NH56 324 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 OR1L3Q8NH93 324 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 MOSPD2Q8NHP6 518 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 GATAD1Q8WUU5 269 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 PIGBQ92521 554 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 LPGAT1Q92604 370 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 NSUN4Q96CB9 384 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 SPDL1Q96EA4 605 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 FAM20AQ96MK3 541 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 ZIM3Q96PE6 472 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 NEK1Q96PY6 1258 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 ABHD1Q96SE0 405 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 SDF4Q9BRK5 362 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 MXD3Q9BW11 206 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 MAK16Q9BXY0 300 aaKnown RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 GOLPH3LQ9H4A5 285 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 SYNCQ9H7C4 482 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 PDE7BQ9NP56 450 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 SERINC1Q9NRX5 453 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 P4HTMQ9NXG6 502 aa2.06□□□□□ -2.08
PCM1-208ENST00000518877 CRNNQ9UBG3 495 aaPredicted RBP2.06□□□□□ -2.08
PCM1-208ENST00000518877 CTSZQ9UBR2 303 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms