RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 BTBD10Q9BSF8 475 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 HAUS8Q9BT25 410 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RAB11FIP5Q9BXF6 653 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PCBD2Q9H0N5 130 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TMEM168Q9H0V1 697 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 WASH6PQ9NQA3 447 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PRDM8Q9NQV8 689 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 AASDHPPTQ9NRN7 309 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 GIMAP2Q9UG22 337 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PLAGL1Q9UM63 463 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 INVSQ9Y283 1065 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 HEBP2Q9Y5Z4 205 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 DGKBQ9Y6T7 804 aa7.4□□□□□ -1.22
SCARNA20.1-201ENST00000516009 THADAQ6YHU6 1953 aa7.4□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ARHGEF17Q96PE2 2063 aaPredicted RBP7.4□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPTY2D1-AS1A0A0U1RR47 76 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LOC100653049A0A140TA62 436 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR52A4PA6NMU1 304 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 K7ESF4 209 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PSMD12O00232 456 aaPredicted RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LSM1O15116 133 aaKnown RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAP3K13O43283 966 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KRT34O76011 436 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PDYNP01213 254 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CTSEP14091 401 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NPPBP16860 134 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AK4P27144 223 aaPredicted RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NDUFS1P28331 727 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CD38P28907 300 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CASP2P42575 452 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACADVLP49748 655 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RAB28P51157 221 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BLKP51451 505 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EMX2Q04743 252 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZNF33BQ06732 778 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ILF3Q12906 894 aaKnown RBP eCLIP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GRIK2Q13002 908 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EIF2B5Q13144 721 aaKnown RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LAPTM5Q13571 262 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CYLC2Q14093 348 aaPredicted RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DOC2AQ14183 400 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TCEA2Q15560 299 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SMU1Q2TAY7 513 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AP5B1Q2VPB7 878 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DNAL1Q4LDG9 190 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AGKQ53H12 422 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PAGE2BQ5JRK9 111 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C6orf136Q5SQH8 315 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FRG2Q64ET8 278 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ATG9BQ674R7 924 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GRHL2Q6ISB3 625 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC30A9Q6PML9 568 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SUSD1Q6UWL2 747 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LCTLQ6UWM7 567 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLCO4C1Q6ZQN7 724 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RINLQ6ZS11 566 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MIER2Q8N344 545 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SFRP1Q8N474 314 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DEFB119Q8N690 84 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LMNTD1Q8N9Z9 388 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MFSD2AQ8NA29 543 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FNDC5Q8NAU1 212 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC5A11Q8WWX8 675 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SMPDL3AQ92484 453 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NEIL2Q969S2 332 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SH3KBP1Q96B97 665 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 REPS1Q96D71 796 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MTFMTQ96DP5 389 aaKnown RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FRG2BQ96QU4 278 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EFCAB11Q9BUY7 163 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TBC1D10AQ9BXI6 508 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GSDMCQ9BYG8 508 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CD320Q9NPF0 282 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GPR27Q9NS67 375 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FARSBQ9NSD9 589 aaKnown RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AIG1Q9NVV5 245 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TAS2R1Q9NYW7 299 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCDC167Q9P0B6 97 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TBC1D29Q9UFV1 150 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCOLCE2Q9UKZ9 415 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EIF3LQ9Y262 564 aaKnown RBP7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCDHGA11Q9Y5H2 935 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 COLEC10Q9Y6Z7 277 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ABCA7Q8IZY2 2146 aa7.39□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SERTM1A2A2V5 107 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 H0YIV9 168 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RSL1D1O76021 490 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EML2O95834 649 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1GALT1C1LP0DN25 315 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 F3P13726 295 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC2A4P14672 509 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CD22P20273 847 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GPX3P22352 226 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PKLRP30613 574 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms