RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RUNX1T1Q06455 604 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MAD2L1Q13257 205 aaPredicted RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MAB21L1Q13394 359 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 DSC3Q14574 896 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 GPR19Q15760 415 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 AMHR2Q16671 573 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ZBTB37Q5TC79 503 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CACHD1Q5VU97 1274 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 METTL7BQ6UX53 244 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ENKURQ8TC29 256 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CHTF18Q8WVB6 975 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 NDRG1Q92597 394 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CELF6Q96J87 481 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 PPP3R2Q96LZ3 170 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 TBCDQ9BTW9 1192 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 TMEM39BQ9GZU3 492 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 WASH6PQ9NQA3 447 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 FARSBQ9NSD9 589 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 SNX8Q9Y5X2 465 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MROH6A6NGR9 719 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MYO1GB0I1T2 1018 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 RGS5O15539 181 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 SLC22A5O76082 557 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 WDR47O94967 919 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 HTR7P34969 479 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 GGT2P36268 569 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ALDH9A1P49189 494 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ETV1P50549 477 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 WNT3AP56704 352 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 PSPHP78330 225 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MFSD13AQ14CX5 517 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF79Q15937 498 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 HABP4Q5JVS0 413 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 C10orf62Q5T681 223 aaPredicted RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ARMCX2Q7L311 632 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 EFHBQ8N7U6 833 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 TTLQ8NG68 377 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 BTN2A2Q8WVV5 523 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CCDC120Q96HB5 630 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 RACGAP1Q9H0H5 632 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 PAK6Q9NQU5 681 aaPredicted RBP12.49□□□□□ -0.41
SMAD1-215ENST00000515385 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
SMAD1-215ENST00000515385 IQCMA0A1B0GVH7 501 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 DFFAO00273 331 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 WNT9AO14904 365 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ECI2O75521 394 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 FABP3P05413 133 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ALAS2P22557 587 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 GZMMP51124 257 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 BLVRAP53004 296 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ABHD18Q0P651 414 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 CAMK2GQ13555 558 aaPredicted RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 CLVS2Q5SYC1 327 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 KDELC1Q6UW63 502 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 SCIMPQ6UWF3 145 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 TRIM69Q86WT6 500 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 PGBD3Q8N328 593 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 DENND6BQ8NEG7 585 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 GPR151Q8TDV0 419 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 DCLRE1CQ96SD1 692 aaKnown RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 HTATIP2Q9BUP3 242 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 BEX2Q9BXY8 128 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 C11orf54Q9H0W9 315 aaPredicted RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 WDCPQ9H6R7 721 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ABCB8Q9NUT2 735 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 RPS6KA6Q9UK32 745 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF214Q9UL59 606 aaPredicted RBP12.48□□□□□ -0.41
SMAD1-215ENST00000515385 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 HSPB11Q9Y547 144 aa12.48□□□□□ -0.41
SMAD1-215ENST00000515385 TRBV5-3A0A0A0MS03 114 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-215ENST00000515385 PER2O15055 1255 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 MAFKO60675 156 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 GLP2RO95838 553 aa12.47□□□□□ -0.41
SMAD1-215ENST00000515385 S100A6P06703 90 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms