RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 REXO1L1PQ8IX06 675 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 LRRC57Q8N9N7 239 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ACBD4Q8NC06 268 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF285Q96NJ3 590 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 FICDQ9BVA6 458 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 TRMT1Q9NXH9 659 aaKnown RBP13.3□□□□□ -0.28
SPCS3-204ENST00000513139 PLA2G3Q9NZ20 509 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
SPCS3-204ENST00000513139 ACANP16112 2415 aa13.3□□□□□ -0.28
SPCS3-204ENST00000513139 HCFC1P51610 2035 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 FITM1A5D6W6 292 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 C19orf84I3L1E1 186 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 AP2A2O94973 939 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 BMP10O95393 424 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 KRT1P04264 644 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 SERPINA7P05543 415 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 ACRV1P26436 265 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 PEBP1P30086 187 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 SLC1A1P43005 524 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF140P52738 457 aaPredicted RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 GEMP55040 296 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 PLOD1Q02809 727 aaPredicted RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 OCA2Q04671 838 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 TLE4Q04727 773 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 KLC1Q07866 573 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 TAZQ16635 292 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 C11orf63Q6NUN7 778 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 RIPOR1Q6ZS17 1223 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 RNF10Q8N5U6 811 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 CLDN19Q8N6F1 224 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 TTC29Q8NA56 475 aaPredicted RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 OR13C4Q8NGS5 318 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 SUN3Q8TAQ9 357 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 BRIX1Q8TDN6 353 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 ADAMTS18Q8TE60 1221 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 SLC22A18Q96BI1 424 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 TSGA10Q9BZW7 698 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 ENKD1Q9H0I2 346 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 FAM96AQ9H5X1 160 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 GPAMQ9HCL2 828 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 INTS7Q9NVH2 962 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 DDX56Q9NY93 547 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 RSPH14Q9UHP6 348 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
SPCS3-204ENST00000513139 CAPN6Q9Y6Q1 641 aa13.29□□□□□ -0.28
SPCS3-204ENST00000513139 HEATR5BQ9P2D3 2071 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 NSG1A0A0A6YYJ2 146 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 USP27XA6NNY8 438 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 SMAPO00193 183 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 QSOX1O00391 747 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 FTCDO95954 541 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZGLP1P0C6A0 271 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 PECAM1P16284 738 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ADRA1AP35348 466 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 CDKN2BP42772 138 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 NSG1P42857 185 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 OR1D4P47884 311 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 MARCKSL1P49006 195 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 RAB28P51157 221 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 AP2B1P63010 937 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 MSLNQ13421 630 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 Q6ZPB1 254 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF662Q6ZS27 426 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 SERPINA9Q86WD7 417 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 STT3BQ8TCJ2 826 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 KRT35Q92764 455 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 P3H4Q92791 437 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 MIEF2Q96C03 454 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 CALR3Q96L12 384 aaKnown RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 TREX2Q9BQ50 279 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 MESP1Q9BRJ9 268 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 GBA3Q9H227 469 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF304Q9HCX3 659 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF282Q9UDV7 671 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 C3orf18Q9UK00 162 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
SPCS3-204ENST00000513139 ZNF469Q96JG9 3925 aaPredicted RBP13.28□□□□□ -0.28
SPCS3-204ENST00000513139 IGLV3-12A0A075B6K2 115 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 HACD1B0YJ81 288 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 H7C0S8 307 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 FANCGO15287 622 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 CST8O60676 142 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.29
SPCS3-204ENST00000513139 PRAMEF2O60811 474 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 DIAPH2O60879 1101 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 FKBP9O95302 570 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 WDPCPO95876 746 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 COX6A1P12074 109 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 MCM3P25205 808 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 MC4RP32245 332 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 CACNG1Q06432 222 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 C3AR1Q16581 482 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 FAAH2Q6GMR7 532 aa13.27□□□□□ -0.29
SPCS3-204ENST00000513139 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms