RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ISM1	B1AKI9	464 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	COPE	O14579	308 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	DUX1	O43812	170 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	GLRA3	O75311	464 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	CPNE6	O95741	557 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MT-CO3	P00414	261 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	GSTA1	P08263	222 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MYZAP	P0CAP1	466 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	THRA	P10827	490 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	NPPB	P16860	134 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	GGT5	P36269	586 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	ETV4	P43268	484 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	CCR10	P46092	362 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	AP1S2	P56377	157 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MAGOH	P61326	146 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	ILK	Q13418	452 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	TSTA3	Q13630	321 aa	Predicted RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	ARHGAP19	Q14CB8	494 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	SETDB1	Q15047	1291 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	PFKFB4	Q16877	469 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	TSNAXIP1	Q2TAA8	658 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	TMEM71	Q6P5X7	295 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	TTC23L	Q6PF05	361 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	WDR74	Q6RFH5	385 aa	Predicted RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	SPESP1	Q6UW49	350 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	FRA10AC1	Q70Z53	315 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	SYTL1	Q8IYJ3	562 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	PTGR2	Q8N8N7	351 aa	Predicted RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MAGEC3	Q8TD91	643 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	PHF21B	Q96EK2	531 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	RNF31	Q96EP0	1072 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MED8	Q96G25	268 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	AHCYL2	Q96HN2	611 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	NSUN5	Q96P11	429 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	EGFL8	Q99944	293 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MRPL57	Q9BQC6	102 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MECR	Q9BV79	373 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	RAB33B	Q9H082	229 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	MRPL46	Q9H2W6	279 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	FAM60A	Q9NP50	221 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	SEMA5B	Q9P283	1151 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	TAC3	Q9UHF0	121 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	DCDC2	Q9UHG0	476 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	ENTPD2	Q9Y5L3	495 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	CNOT1	A5YKK6	2376 aa	Known RBP	14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	NCOR2	Q9Y618	2525 aa		14.03	□□□□□ -0.16
MATR3-238	ENST00000512107	SLC9B1P1	A6NJY1	282 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107		H3BQF6	201 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	PPP6C	O00743	305 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	ANXA5	P08758	320 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	RBP1	P09455	135 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SPINK2	P20155	84 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	HIST1H2AD	P20671	130 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	OAS2	P29728	719 aa	Known RBP	14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SEPHS1	P49903	392 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SNRPN	P63162	240 aa	Known RBP	14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SPIDR	Q14159	915 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	KCNAB1	Q14722	419 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	PCLAF	Q15004	111 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	UNC50	Q53HI1	259 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	AGBL2	Q5U5Z8	902 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	ARHGAP22	Q7Z5H3	698 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	RAB44	Q7Z6P3	723 aa	Predicted RBP	14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	THOC6	Q86W42	341 aa	Known RBP	14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	ARMC2	Q8NEN0	867 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	OR2L3	Q8NG85	312 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	OR4D9	Q8NGE8	314 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	UBTD2	Q8WUN7	234 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	ADAMTS14	Q8WXS8	1223 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SMPDL3A	Q92484	453 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	PMEPA1	Q969W9	287 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	HIST1H2AH	Q96KK5	128 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	FAM111A	Q96PZ2	611 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	TRAPPC9	Q96Q05	1148 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	HIST1H2AJ	Q99878	128 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	H2AFJ	Q9BTM1	129 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	MLXIPL	Q9NP71	852 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	LNPEP	Q9UIQ6	1025 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	WASF3	Q9UPY6	502 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	SLC22A14	Q9Y267	594 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	HEATR5B	Q9P2D3	2071 aa		14.02	□□□□□ -0.17
MATR3-238	ENST00000512107	C2orf74	A8MZ97	194 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	CS	O75390	466 aa	Known RBP	14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	WDR47	O94967	919 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	HGF	P14210	728 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	TSPAN8	P19075	237 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	MAG	P20916	626 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	EEF1D	P29692	281 aa	Known RBP	14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	GRIA3	P42263	894 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	GABRA4	P48169	554 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	PPM1F	P49593	454 aa	Predicted RBP	14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	WDR4	P57081	412 aa	Known RBP	14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	SH3BP2	P78314	561 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	E2F1	Q01094	437 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	KIR2DS3	Q14952	304 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	ISX	Q2M1V0	245 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	CATSPERE	Q5SY80	951 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	PRAMEF13	Q5VWM6	474 aa		14.01	□□□□□ -0.17
MATR3-238	ENST00000512107	SULT1C3	Q6IMI6	304 aa		14.01	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms