RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 HES3Q5TGS1 186 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 KLHL24Q6TFL4 600 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 IL27RAQ6UWB1 636 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 RINLQ6ZS11 566 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 OTUD6AQ7L8S5 288 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 ZCCHC9Q8N567 271 aaKnown RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 ZNF713Q8N859 430 aaPredicted RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 SPATA22Q8NHS9 363 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 ETNPPLQ8TBG4 499 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 LRRC8CQ8TDW0 803 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 ERLEC1Q96DZ1 483 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 LRFN5Q96NI6 719 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP53-206ENST00000510737 PTPRHQ9HD43 1115 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 C6orf50Q9HD87 102 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 G6PC2Q9NQR9 355 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 ZFP57Q9NU63 452 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 PRMT7Q9NVM4 692 aaPredicted RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 SMARCAL1Q9NZC9 954 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 PCDHGA1Q9Y5H4 931 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 SNX9Q9Y5X1 595 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 SLCO1B1Q9Y6L6 691 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 NUP210Q8TEM1 1887 aaPredicted RBP6.26□□□□□ -1.41
USP53-206ENST00000510737 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
USP53-206ENST00000510737 A0A087WWV3 80 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 K7ENP7 123 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 BCAT2O15382 392 aaPredicted RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 HSPA12AO43301 675 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 DKC1O60832 514 aaKnown RBP eCLIP6.25□□□□□ -1.41
USP53-206ENST00000510737 ZNF217O75362 1048 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 ADAP00813 363 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 PIGAP37287 484 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 GRK6P43250 576 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 TNFRSF4P43489 277 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 CSNK1EP49674 416 aaKnown RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 PRPF4BQ13523 1007 aaKnown RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 KRTAP21-3Q3LHN1 58 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 ZC2HC1CQ53FD0 456 aaPredicted RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 DCAF6Q58WW2 860 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 GJB7Q6PEY0 223 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 INO80CQ6PI98 192 aaPredicted RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 CASC1Q6TDU7 716 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 DHX40Q8IX18 779 aaKnown RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 GCNAQ96QF7 691 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 OR1F2PQ96R84 312 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 ELAC2Q9BQ52 826 aaKnown RBP6.25□□□□□ -1.41
USP53-206ENST00000510737 LRRC2Q9BYS8 371 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 CABIN1Q9Y6J0 2220 aa6.25□□□□□ -1.41
USP53-206ENST00000510737 LRRIQ4A6NIV6 560 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 HIP1O00291 1037 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 SLITRK3O94933 977 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 SERPINC1P01008 464 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 APOHP02749 345 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 KCNE1P15382 129 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 GM2AP17900 193 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 TNFSF9P41273 254 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 TUFMP49411 452 aaKnown RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 FUT6P51993 359 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 ARSFP54793 590 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 OSTNP61366 133 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 ZNF155Q12901 538 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 PPP2R5CQ13362 524 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 IGFBP7Q16270 282 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 C14orf177Q52M58 125 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 KCNT1Q5JUK3 1230 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 NEK10Q6ZWH5 1172 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 STKLD1Q8NE28 680 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 TBCKQ8TEA7 893 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 NCSTNQ92542 709 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 RNF183Q96D59 192 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 MTBPQ96DY7 904 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 FEM1CQ96JP0 617 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 ZNF578Q96N58 590 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 SEPT5Q99719 369 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 ADPGKQ9BRR6 497 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 LXNQ9BS40 222 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 POLR3FQ9H1D9 316 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 SLC38A7Q9NVC3 462 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 ANKRD10Q9NXR5 420 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 WSB2Q9NYS7 404 aaPredicted RBP6.24□□□□□ -1.41
USP53-206ENST00000510737 ZNF224Q9NZL3 707 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 SLCO3A1Q9UIG8 710 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 NFE2L3Q9Y4A8 694 aa6.24□□□□□ -1.41
USP53-206ENST00000510737 KNTC1P50748 2209 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 CELSR2Q9HCU4 2923 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 ZFHX3Q15911 3703 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 CEP192Q8TEP8 1941 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 PLXND1Q9Y4D7 1925 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 CSMD1Q96PZ7 3565 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GAGE7O76087 117 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 LDOC1O95751 146 aaPredicted RBP6.23□□□□□ -1.41
USP53-206ENST00000510737 AMBPP02760 352 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 APODP05090 189 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 KRT18P05783 430 aaKnown RBP6.23□□□□□ -1.41
USP53-206ENST00000510737 MYL1P05976 194 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 DHRS4L1P0CG22 281 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GAGE12FP0CL80 117 aa6.23□□□□□ -1.41
USP53-206ENST00000510737 GAGE12GP0CL81 117 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms