RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TTLQ8NG68 377 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 ZNF514Q96K75 400 aaPredicted RBP10.36□□□□□ -0.75
NEK1-206ENST00000510533 IL4I1Q96RQ9 567 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 SLC6A15Q9H2J7 730 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 SLC32A1Q9H598 525 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 USP29Q9HBJ7 922 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 ZDHHC3Q9NYG2 299 aa10.36□□□□□ -0.75
NEK1-206ENST00000510533 LOC100130705A0A1B0GUX0 176 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PSMD9O00233 223 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 TLX3O43711 291 aaPredicted RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 ITGA10O75578 1167 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PIGRP01833 764 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PEPDP12955 493 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ELNP15502 786 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PRKCHP24723 683 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CSKP41240 450 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 GAD2Q05329 585 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SLC18A2Q05940 514 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SLBPQ14493 270 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEK1-206ENST00000510533 TXNRD3NBQ6F5E7 133 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 TCEAL6Q6IPX3 200 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ZC3HC1Q86WB0 502 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 ZNF548Q8NEK5 533 aaPredicted RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 CEP76Q8TAP6 659 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PYCR2Q96C36 320 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 P2RX2Q9UBL9 471 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 COPS7AQ9UBW8 275 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 AKAP8O43823 692 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 PTPN2P17706 415 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ATF4P18848 351 aaPredicted RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 DGKQP52824 942 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 EIF5AP63241 154 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 NOGQ13253 232 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SPIN4Q56A73 249 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CARD16Q5EG05 197 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SIRPB2Q5JXA9 342 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 OR4F3Q6IEY1 312 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SLC2A7Q6PXP3 512 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 GALNT7Q86SF2 657 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 TMEM110Q86TL2 294 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 AMZ2Q86W34 360 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 MARCH9Q86YJ5 346 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ABCB8Q9NUT2 735 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 TPD52L2O43399 206 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 RLN2P04090 185 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ITGB1P05556 798 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CLUP10909 449 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 DNAJB1P25685 340 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CCR8P51685 355 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PUM1Q14671 1186 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEK1-206ENST00000510533 TIGD5Q53EQ6 642 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CLEC12AQ5QGZ9 265 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ASB18Q6ZVZ8 466 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ERMP1Q7Z2K6 904 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 OR2AJ1Q8NGZ0 328 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 KLHL6Q8WZ60 621 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 RIPOR3Q96MK2 946 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ZNF641Q96N77 438 aaPredicted RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 DPEP2Q9H4A9 486 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ADAP2Q9NPF8 381 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PIGVQ9NUD9 493 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PCDHGB1Q9Y5G3 927 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 OR1I1O60431 355 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 H1F0P07305 194 aaKnown RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 RHDQ02161 417 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 DUOXA1Q1HG43 343 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 LRRC73Q5JTD7 316 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ATAT1Q5SQI0 421 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 FRG2Q64ET8 278 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 SDR16C5Q8N3Y7 309 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CCDC107Q8WV48 283 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 PMEPA1Q969W9 287 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 FRG2BQ96QU4 278 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 MND1Q9BWT6 205 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 ZBTB26Q9HCK0 441 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 C14orf105Q9NVL8 296 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 WRAP73Q9P2S5 460 aaPredicted RBP10.35□□□□□ -0.75
NEK1-206ENST00000510533 TEX264Q9Y6I9 313 aa10.35□□□□□ -0.75
NEK1-206ENST00000510533 CYB5AP00167 134 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 TACSTD2P09758 323 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 CSNK2A2P19784 350 aaPredicted RBP10.34□□□□□ -0.75
NEK1-206ENST00000510533 TUBA1BP68363 451 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 RASGEF1BQ0VAM2 473 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 DEFB115Q30KQ5 88 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 C4orf46Q504U0 113 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
NEK1-206ENST00000510533 CCSAPQ6IQ19 270 aaPredicted RBP10.34□□□□□ -0.75
NEK1-206ENST00000510533 TUBA3EQ6PEY2 450 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 PRSS55Q6UWB4 352 aaPredicted RBP10.34□□□□□ -0.75
NEK1-206ENST00000510533 TUBA1AQ71U36 451 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 NXPE1Q8N323 547 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 COQ8BQ96D53 544 aa10.34□□□□□ -0.75
NEK1-206ENST00000510533 SLC29A3Q9BZD2 475 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms