RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 KCTD11Q693B1 232 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 MFSD12Q6NUT3 480 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FBXO46Q6PJ61 603 aaPredicted RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TAF8Q7Z7C8 310 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 ZER1Q7Z7L7 766 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 MRGPREQ86SM8 312 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 ANKRD46Q86W74 232 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FBXO39Q8N4B4 442 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 IPMKQ8NFU5 416 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 WDR20Q8TBZ3 569 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PROKR1Q8TCW9 393 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 WFIKKN2Q8TEU8 576 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SLC25A28Q96A46 364 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NXNL1Q96CM4 212 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SGF29Q96ES7 293 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CDKN2AIPNLQ96HQ2 116 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 LRFN5Q96NI6 719 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GFI1Q99684 422 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SPAG8Q99932 426 aaPredicted RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TCHPQ9BT92 498 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TBCDQ9BTW9 1192 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 LMF2Q9BU23 707 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 KATNB1Q9BVA0 655 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 C1QTNF3Q9BXJ4 246 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 OSBPL8Q9BZF1 889 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 POLR1EQ9GZS1 481 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 LSG1Q9H089 658 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 UBQLN3Q9H347 655 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PPP1R3EQ9H7J1 279 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PCDH9Q9HC56 1237 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 HHATLQ9HCP6 504 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CISD1Q9NZ45 108 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FETUBQ9UGM5 382 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 ING1Q9UK53 422 aaPredicted RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 HPCAL4Q9UM19 191 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TRAF3IP3Q9Y228 551 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 STRAPQ9Y3F4 350 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 RAP2CQ9Y3L5 183 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SRPRBQ9Y5M8 271 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CEP350Q5VT06 3117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 COL5A2P05997 1499 aaPredicted RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 BRCA1P38398 1863 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SMG6Q86US8 1419 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TAF1LQ8IZX4 1826 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 DICER1Q9UPY3 1922 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 C2orf92A0A1B0GVN3 265 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SLC22A23A1A5C7 686 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 MAGEA13PA6NCF6 341 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FAM90A10PA6NDY2 464 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CFAP73A6NFT4 308 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 HEPACAM2A8MVW5 462 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 TARM1B6A8C7 271 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GPR89AB7ZAQ6 455 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 E2F3O00716 465 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SLC16A5O15375 505 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FLRT2O43155 660 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 RNASEH1O60930 286 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CNOT3O75175 753 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PROP1O75360 226 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SPAG6O75602 509 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE7O76087 117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 MFN2O95140 757 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 ZWINTO95229 277 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 MT-ATP6P00846 226 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 IGHV2-70P01814 119 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 HMOX1P09601 288 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GPR89BP0CG08 455 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE12FP0CL80 117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE12GP0CL81 117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE12IP0CL82 117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CBSLP0DN79 551 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CD22P20273 847 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NMBRP28336 390 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CBSP35520 551 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 AVPR1AP37288 418 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 APOBEC1P41238 236 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GDF5P43026 501 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SERPINH1P50454 418 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NME5P56597 212 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PTENP60484 403 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 CFHR1Q03591 330 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 ABRQ12979 859 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE1Q13065 139 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GAGE4Q13068 117 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NPTX1Q15818 432 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 C6orf10Q5SRN2 563 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NSUN5P2Q63ZY6 315 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 FIGLAQ6QHK4 219 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 AFTPHQ6ULP2 937 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 B3GLCTQ6Y288 498 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 GPR141Q7Z602 305 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NRARPQ7Z6K4 114 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 NRROSQ86YC3 692 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 BOLLQ8N9W6 283 aaKnown RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 PPP4R1Q8TF05 950 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 P2RX5Q93086 422 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 DHX58Q96C10 678 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 BSCL2Q96G97 398 aaPredicted RBP2.16□□□□□ -2.06
PDE4D-218ENST00000509368 SAMD8Q96LT4 415 aa2.16□□□□□ -2.06
PDE4D-218ENST00000509368 C17orf62Q9BQA9 187 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms