RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 UGT3A1Q6NUS8 523 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 NUP54Q7Z3B4 507 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 NUDT13Q86X67 352 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 MINDY1Q8N5J2 469 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 AQP11Q8NBQ7 271 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 C11orf45Q8TAV5 145 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 MIPOL1Q8TD10 442 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 GATAD1Q8WUU5 269 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 NSUN4Q96CB9 384 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 SPACA9Q96E40 222 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 THOC1Q96FV9 657 aaKnown RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 CALML4Q96GE6 196 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 SFXN2Q96NB2 322 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 MYNNQ9NPC7 610 aa3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 CRNNQ9UBG3 495 aaPredicted RBP3.8□□□□□ -1.8
UBE2D3-225ENST00000508476 A0A1W2PPR1 153 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 PI4K2BG5E9Z4 385 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 TRUB2O95900 331 aaKnown RBP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 VTNP04004 478 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 PORP16435 677 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 MATR3P43243 847 aaKnown RBP eCLIP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 NAP1L1P55209 391 aaKnown RBP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 SIM2Q14190 667 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 LY6DQ14210 128 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 NTRK2Q16620 822 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 C11orf63Q6NUN7 778 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 RPAP2Q8IXW5 612 aaPredicted RBP3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 THAP8Q8NA92 274 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 APPL2Q8NEU8 664 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 OR10S1Q8NGN2 331 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 MAPK15Q8TD08 544 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 TEX12Q9BXU0 123 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 PDE7BQ9NP56 450 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 MUTYHQ9UIF7 546 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 CSNK1G3Q9Y6M4 447 aa3.79□□□□□ -1.8
UBE2D3-225ENST00000508476 LOC100509620A0A075B734 347 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 SNURFLB1AK76 121 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 IGHV2-70P01814 119 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 AZU1P20160 251 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 SAT1P21673 171 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 MAPK12P53778 367 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 XGP55808 180 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 CYCSP99999 105 aaKnown RBP3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 EPS8Q12929 822 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 SNAPC1Q16533 368 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 ZNF74Q16587 644 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 C15orf59Q2T9L4 293 aaPredicted RBP3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 RILPL1Q5EBL4 403 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 ITPRIPL1Q6GPH6 555 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 G2E3Q7L622 706 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 TAGAPQ8N103 731 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 CFAP61Q8NHU2 1237 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 ATP8B4Q8TF62 1192 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 PRPF31Q8WWY3 499 aaKnown RBP3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 SLAMF9Q96A28 289 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 PTERQ96BW5 349 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 TMCO6Q96DC7 493 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 TLE6Q9H808 572 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 GIMAP4Q9NUV9 329 aa3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 TEX10Q9NXF1 929 aaPredicted RBP3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 ABT1Q9ULW3 272 aaKnown RBP3.78□□□□□ -1.8
UBE2D3-225ENST00000508476 TSPAN9O75954 239 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 IGHEP01854 428 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 EIF2DP41214 584 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 CCR10P46092 362 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 PAX8Q06710 450 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 CBWD6Q4V339 395 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 CBWD3Q5JTY5 395 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 LYSMD4Q5XG99 296 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 KIF6Q6ZMV9 814 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 CERS3Q8IU89 383 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 ERC1Q8IUD2 1116 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 LGI2Q8N0V4 545 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 NUP37Q8NFH4 326 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 ABHD1Q96SE0 405 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 RAB11FIP5Q9BXF6 653 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 TRIM6Q9C030 488 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 TRPV4Q9HBA0 871 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 TBC1D22BQ9NU19 505 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 PRMT7Q9NVM4 692 aaPredicted RBP3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 GDE1Q9NZC3 331 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 RNF150Q9ULK6 438 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 TDRD15B5MCY1 1934 aaKnown RBP3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 MYH15Q9Y2K3 1946 aa3.77□□□□□ -1.81
UBE2D3-225ENST00000508476 A0A1W2PPM1 405 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 NEMP2A6NFY4 417 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 SERINC4A6NH21 518 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 ALOX12P18054 663 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 CD27P26842 260 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 TMEM50BP56557 158 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 RIGQ13278 110 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 CUL4AQ13619 759 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 BAATQ14032 418 aaPredicted RBP3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.816e-8■■■■■ 34.9
UBE2D3-225ENST00000508476 CES4AQ5XG92 561 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 MFSD12Q6NUT3 480 aa3.76□□□□□ -1.81
UBE2D3-225ENST00000508476 LINC00612Q8N6U2 182 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms