RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SOX8P57073 446 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CCZ1BP86790 482 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CCZ1P86791 482 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 NKG7Q16617 165 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ZC3H12BQ5HYM0 836 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 YOD1Q5VVQ6 348 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 MRNIPQ6NTE8 343 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 TTC23LQ6PF05 361 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CNSTQ6PJW8 725 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 DTWD1Q8N5C7 304 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 OR2L3Q8NG85 312 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 OR2A1Q8NGT9 310 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ZUFSPQ96AP4 578 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 FAM136AQ96C01 138 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 MIPEPQ99797 713 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 TRIM56Q9BRZ2 755 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 ZNF552Q9H707 407 aaPredicted RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 WDR54Q9H977 334 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 SLAMF7Q9NQ25 335 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CUTCQ9NTM9 273 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 CTSFQ9UBX1 484 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.41
HMGCS1-205ENST00000508319 NOTCH2Q04721 2471 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 TCP11X1B4DZS4 312 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 TARM1B6A8C7 271 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 H3BMM5 538 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 SOCS6O14544 535 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 MED26O95402 600 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 MATN4O95460 622 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 ALBP02768 609 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 ESR1P03372 595 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 ALPPP05187 535 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 ERGP11308 486 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 VPS41P49754 854 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 TERF1P54274 439 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 YBX1P67809 324 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 FASTKQ14296 549 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 GRM7Q14831 915 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 CYP2A13Q16696 494 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 ANKRD22Q5VYY1 191 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 IGFL3Q6UXB1 125 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 RNF44Q7L0R7 432 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 OVCH1Q7RTY7 1134 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 CAND1Q86VP6 1230 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 CILP2Q8IUL8 1156 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 RAB42Q8N4Z0 105 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 METTL27Q8N6F8 245 aaPredicted RBP12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 INPP5DQ92835 1189 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 NACC2Q96BF6 587 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 FOPNLQ96NB1 174 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 HOMER3Q9NSC5 361 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 SPATA7Q9P0W8 599 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 GALPQ9UBC7 116 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 FBXL4Q9UKA2 621 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 CRYL1Q9Y2S2 319 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 MDC1Q14676 2089 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 CENPEQ02224 2701 aa12.45□□□□□ -0.42
HMGCS1-205ENST00000508319 OR2A25A4D2G3 310 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 ARHGEF33A8MVX0 844 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 ALOX12BO75342 701 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 MMP11P24347 488 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 FMO4P31512 558 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 VSX2P58304 361 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 GPS1Q13098 491 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 AIMP2Q13155 320 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 PLEKHN1Q494U1 663 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 ACSBG2Q5FVE4 666 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 FHL5Q5TD97 284 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 ARMC3Q5W041 872 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 FRMPD2BQ6IN97 320 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 CENPUQ71F23 418 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 LRRC8AQ8IWT6 810 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 TTC29Q8NA56 475 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 GIMAP7Q8NHV1 300 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 MAGEC3Q8TD91 643 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 C19orf60Q96EN9 201 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 TCF12Q99081 682 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 SYNPO2LQ9H987 977 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 ZBTB20Q9HC78 741 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 SLC6A20Q9NP91 592 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 CDC23Q9UJX2 597 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 HS3ST3B1Q9Y662 390 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 FAM169AQ9Y6X4 670 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 POLEQ07864 2286 aa12.44□□□□□ -0.42
HMGCS1-205ENST00000508319 LOC105369274A0A096LPK9 316 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 LOC102723532A0A0G2JNH3 316 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 A0A0J9YVX5 310 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 FAM237BA0A1B0GVD1 139 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms