RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ENO3P13929 434 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 ARNTP27540 789 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 FMO4P31512 558 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 GRIA3P42263 894 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 RELAQ04206 551 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 NADK2Q4G0N4 442 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 CTSL3PQ5NE16 218 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 FHL5Q5TD97 284 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 LRRC8EQ6NSJ5 796 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 JMJD6Q6NYC1 403 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 CILP2Q8IUL8 1156 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 IQCKQ8N0W5 287 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 OR2L3Q8NG85 312 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 OR9A1PQ8NGU1 263 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 MAGOHBQ96A72 148 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 MVB12AQ96EY5 273 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 IL17FQ96PD4 163 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 SEMA3GQ9NS98 782 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 CDC14AQ9UNH5 594 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 PPP2R2CQ9Y2T4 447 aa13.83□□□□□ -0.2
HMGCS1-203ENST00000507004 PTPN13Q12923 2485 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 UBR5O95071 2799 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 A6NL46 340 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 EIF3FO00303 357 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 TXNDC9O14530 226 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 ERGP11308 486 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 DHX34Q14147 1143 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 INPP5JQ15735 1006 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 MUM1Q2TAK8 710 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 SLC6A19Q695T7 634 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 FCRL6Q6DN72 434 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 CNSTQ6PJW8 725 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 RNF44Q7L0R7 432 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 ZADH2Q8N4Q0 377 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 OR2A1Q8NGT9 310 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 KCNJ9Q92806 393 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 ZFYVE21Q9BQ24 234 aa13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 CUEDC1Q9NWM3 386 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 SNRNP200O75643 2136 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 SETXQ7Z333 2677 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-203ENST00000507004 FER1L5A0AVI2 2057 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 HYKKA2RU49 373 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CTAGE9A4FU28 777 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 MYO1CO00159 1063 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 NIPSNAP2O75323 286 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 PSIP1O75475 530 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 USP1O94782 785 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 ERVK-10P10266 1014 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 GP1BBP13224 206 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CXCR5P32302 372 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 RPA3P35244 121 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 BDKRB1P46663 353 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 ABATP80404 500 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CCZ1BP86790 482 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 OCA2Q04671 838 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 NKG7Q16617 165 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 WASHC2DQ5SRD0 308 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 GARNL3Q5VVW2 1013 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 PPP1R32Q7Z5V6 425 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 TAX1BP1Q86VP1 789 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 C2orf73Q8N5S3 287 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 RBMXL3Q8N7X1 1067 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CDC23Q9UJX2 597 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 B3GNT3Q9Y2A9 372 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 CRYL1Q9Y2S2 319 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 NFS1Q9Y697 457 aa13.81□□□□□ -0.2
HMGCS1-203ENST00000507004 OR2A25A4D2G3 310 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 PGRMC1O00264 195 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 CES2O00748 559 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ZBTB14O43829 449 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 UMODP07911 640 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 MPC1LP0DKB6 136 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 HRH2P25021 359 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 FNTAP49354 379 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 VPS41P49754 854 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 VSX2P58304 361 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 SRSF1Q07955 248 aaKnown RBP eCLIP13.8□□□□□ -0.23e-7■■■■□ 22.3
HMGCS1-203ENST00000507004 SLC9A5Q14940 896 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 RBBP7Q16576 425 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 KLHL38Q2WGJ6 581 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 UGT3A1Q6NUS8 523 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 CES3Q6UWW8 571 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 CENPUQ71F23 418 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 CAND1Q86VP6 1230 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 FAM20CQ8IXL6 584 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 COL26A1Q96A83 441 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 SPSB2Q99619 263 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 MIPEPQ99797 713 aa13.8□□□□□ -0.2
HMGCS1-203ENST00000507004 EBNA1BP2Q99848 306 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms