RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ANKRD7Q92527 254 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 GPR22Q99680 433 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 MIPEPQ99797 713 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 CPNE5Q9HCH3 593 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 GPAMQ9HCL2 828 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 CCDC177Q9NQR7 707 aaPredicted RBP16.06■□□□□ 0.16
SNCA-209ENST00000506244 IRAK4Q9NWZ3 460 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 PLCL2Q9UPR0 1127 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 AP1M2Q9Y6Q5 423 aa16.06■□□□□ 0.16
SNCA-209ENST00000506244 TEX51A0A1B0GUA7 166 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 A0A1W2PPV9 198 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 E7ENX8 843 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 OR2B3O76000 313 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 TIAF1O95411 115 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 C1QAP02745 245 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 KLK3P07288 261 aaPredicted RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 STMN1P16949 149 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 CCND1P24385 295 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 PSMB5P28074 263 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 IMPA1P29218 277 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 TAS2R39P59534 338 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 ABATP80404 500 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 TAP2Q03519 686 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 FASTKQ14296 549 aaKnown RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 USP10Q14694 798 aaKnown RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 ZIC1Q15915 447 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 DEFB110Q30KQ9 67 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 THEMIS2Q5TEJ8 643 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 KIAA1614Q5VZ46 1190 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 TLDC1Q6P9B6 456 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 FIGLAQ6QHK4 219 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 TIPARPQ7Z3E1 657 aaKnown RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 ADAMTSL2Q86TH1 951 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 OR2A1Q8NGT9 310 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 OR1L3Q8NH93 324 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 ATL1Q8WXF7 558 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 LRFN5Q96NI6 719 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 CYTH2Q99418 400 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 PCBD2Q9H0N5 130 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 ACTR5Q9H9F9 607 aaPredicted RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 L2HGDHQ9H9P8 463 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 FAM60AQ9NP50 221 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 KCND3Q9UK17 655 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 PADI1Q9ULC6 663 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 NOVA2Q9UNW9 492 aaKnown RBP16.05■□□□□ 0.16
SNCA-209ENST00000506244 SRPK3Q9UPE1 567 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 PDE10AQ9Y233 779 aa16.05■□□□□ 0.16
SNCA-209ENST00000506244 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 EFSO43281 561 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 PIAS1O75925 651 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 KRT37O76014 449 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 LIFP15018 202 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 GRIA3P42263 894 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 TBPL1P62380 186 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 MC1RQ01726 317 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 SLMAPQ14BN4 828 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 ARHGAP40Q5TG30 622 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 ICE2Q659A1 982 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 SUSD1Q6UWL2 747 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 FAM20CQ8IXL6 584 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 DNAJC22Q8N4W6 341 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 DLG3Q92796 817 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 CLIP3Q96DZ5 547 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 DPH2Q9BQC3 489 aaPredicted RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 ACAT2Q9BWD1 397 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 CDC42EP4Q9H3Q1 356 aaKnown RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 LHX9Q9NQ69 397 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 ARL15Q9NXU5 204 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 NINJ2Q9NZG7 142 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 STOX2Q9P2F5 926 aaPredicted RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 TAC3Q9UHF0 121 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 PCDHGA4Q9Y5G9 962 aa16.04■□□□□ 0.16
SNCA-209ENST00000506244 SNRNP200O75643 2136 aaKnown RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 DSPP15924 2871 aaKnown RBP16.04■□□□□ 0.16
SNCA-209ENST00000506244 ZNF891A8MT65 544 aaPredicted RBP16.03■□□□□ 0.16
SNCA-209ENST00000506244 C21orf140B9A014 251 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 NTRK1P04629 796 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 HRH2P25021 359 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 ECHS1P30084 290 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 GABRA4P48169 554 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 RHDQ02161 417 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 PRDX1Q06830 199 aaKnown RBP16.03■□□□□ 0.16
SNCA-209ENST00000506244 ZNF460Q14592 562 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 TCTE1Q5JU00 501 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 PRAMEF13Q5VWM6 474 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 FRA10AC1Q70Z53 315 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 CCDC91Q7Z6B0 441 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 CRELD1Q96HD1 420 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 SLC45A3Q96JT2 553 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 C17orf62Q9BQA9 187 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 DERL2Q9GZP9 239 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 ACSS3Q9H6R3 686 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 EURLQ9NYK6 297 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
SNCA-209ENST00000506244 MTO1Q9Y2Z2 717 aaKnown RBP16.03■□□□□ 0.16
SNCA-209ENST00000506244 LOC101059948A0A1B0GTJ6 334 aa16.02■□□□□ 0.16
SNCA-209ENST00000506244 OR2A25A4D2G3 310 aa16.02■□□□□ 0.16
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