RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ATP1A2P50993 1020 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 IL2P60568 153 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ABHD18Q0P651 414 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 GPS2Q13227 327 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ARHGAP19Q14CB8 494 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 FAM199XQ6PEV8 388 aaPredicted RBP17.15■□□□□ 0.34
SMN1-204ENST00000506163 GPR155Q7Z3F1 870 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 TMEM126BQ8IUX1 230 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ESX1Q8N693 406 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 CEP112Q8N8E3 955 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 OR8K5Q8NH50 307 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ANKRD49Q8WVL7 239 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 IFT81Q8WYA0 676 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 SMPDL3AQ92484 453 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ACAT2Q9BWD1 397 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 SYNPO2LQ9H987 977 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 CAB39LQ9H9S4 337 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 PCDHGA4Q9Y5G9 962 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ATMQ13315 3056 aa17.15■□□□□ 0.34
SMN1-204ENST00000506163 ZNF37AP17032 561 aaPredicted RBP17.14■□□□□ 0.33
SMN1-204ENST00000506163 CYP4F2P78329 520 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 CYB5D1Q6P9G0 228 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 RUFY1Q96T51 708 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 RBBP8Q99708 897 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 CPNE1Q99829 537 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 PARVBQ9HBI1 364 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 SYTL2Q9HCH5 934 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 SLC6A20Q9NP91 592 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 NINJ2Q9NZG7 142 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.14■□□□□ 0.33
SMN1-204ENST00000506163 SERTAD3Q9UJW9 196 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 PCDHB3Q9Y5E6 796 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 KLK4Q9Y5K2 254 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 MRPS18BQ9Y676 258 aaKnown RBP17.14■□□□□ 0.33
SMN1-204ENST00000506163 FER1L5A0AVI2 2057 aa17.14■□□□□ 0.33
SMN1-204ENST00000506163 C8GP07360 202 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 RORAP35398 523 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 GMPRP36959 345 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 LRRC8EQ6NSJ5 796 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PCSK4Q6UW60 755 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 ZNF517Q6ZMY9 492 aaPredicted RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 MCATQ8IVS2 390 aaKnown RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 CTAGE3PQ8IX95 158 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SYTL1Q8IYJ3 562 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 MYO1HQ8N1T3 1032 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 RAB42Q8N4Z0 105 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PPM1NQ8N819 430 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 ZUFSPQ96AP4 578 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PDLIM5Q96HC4 596 aaKnown RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 GPR22Q99680 433 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 EURLQ9NYK6 297 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 STOX2Q9P2F5 926 aaPredicted RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 CROTQ9UKG9 612 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PADI1Q9ULC6 663 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 CDC7O00311 574 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SLC16A5O15375 505 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 MAP3K7O43318 606 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 ZNF749O43361 778 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 CPNE3O75131 537 aaKnown RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 HSD17B2P37059 387 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 GP5P40197 560 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 ITGA1P56199 1179 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SP140Q13342 867 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 TSTA3Q13630 321 aaPredicted RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 FBXO42Q6P3S6 717 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SBSNQ6UWP8 590 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SPATA6LQ8N4H0 392 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 CT55Q8WUE5 264 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 CDKL2Q92772 493 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 BBC3Q96PG8 261 aaPredicted RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 GPN2Q9H9Y4 310 aaPredicted RBP17.13■□□□□ 0.33
SMN1-204ENST00000506163 FANCEQ9HB96 536 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PCMTD2Q9NV79 361 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 PLCL2Q9UPR0 1127 aa17.13■□□□□ 0.33
SMN1-204ENST00000506163 SMG1Q96Q15 3661 aaKnown RBP17.12■□□□□ 0.33
SMN1-204ENST00000506163 OR2A25A4D2G3 310 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 TARM1B6A8C7 271 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 E7EQ34 232 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 NKX2-8O15522 239 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 OR2B3O76000 313 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 FKBP9O95302 570 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 CYP2A7P20853 494 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 GCGRP47871 477 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 POU4F1Q01851 419 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 PRDX1Q06830 199 aaKnown RBP17.12■□□□□ 0.33
SMN1-204ENST00000506163 ICE2Q659A1 982 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 ZNF385CQ66K41 422 aaPredicted RBP17.12■□□□□ 0.33
SMN1-204ENST00000506163 ZNF655Q8N720 491 aaPredicted RBP17.12■□□□□ 0.33
SMN1-204ENST00000506163 SLC45A3Q96JT2 553 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 CCDC138Q96M89 665 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 LRFN5Q96NI6 719 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 ZNF285Q96NJ3 590 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 DPH7Q9BTV6 452 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 FAM129AQ9BZQ8 928 aa17.12■□□□□ 0.33
SMN1-204ENST00000506163 UNKQ9C0B0 810 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms