RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MDFICQ9P1T7 246 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 TNNQ9UQP3 1299 aa3.61□□□□□ -1.83
TOPBP1-204ENST00000505804 CASTOR2A6NHX0 329 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 ARPC2O15144 300 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 AP2A2O94973 939 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 GSRP00390 522 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 FDPSP14324 419 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 PTAFRP25105 342 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 CD27P26842 260 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 MAGEA11P43364 429 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 ZNF790Q6PG37 636 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 SUSD1Q6UWL2 747 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 ERN2Q76MJ5 926 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 FAM219AQ8IW50 185 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 KIRREL3Q8IZU9 778 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 CCAR2Q8N163 923 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 TMEM178AQ8NBL3 297 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 DDHD1Q8NEL9 900 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 KCNE4Q8WWG9 221 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 SUSD6Q92537 303 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 RBM4Q9BWF3 364 aaKnown RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 TXNDC16Q9P2K2 825 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 POLLQ9UGP5 575 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 ARID2Q68CP9 1835 aa3.6□□□□□ -1.83
TOPBP1-204ENST00000505804 IGHV4-4A0A075B6R2 117 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 MSGN1A6NI15 193 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 NR5A2O00482 541 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 PSMD14O00487 310 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 KLF11O14901 512 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 KRT86O43790 486 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 CDC123O75794 336 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 RAF1P04049 648 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 TCF4P15884 667 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 EPCAMP16422 314 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 ALDH4A1P30038 563 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 ATP12AP54707 1039 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 GSDMDP57764 484 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 KLC1Q07866 573 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 KRT81Q14533 505 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 NPTX1Q15818 432 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 PHKG1Q16816 387 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 SLC35D3Q5M8T2 416 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 BHLHB9Q6PI77 547 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 NDUFAF2Q8N183 169 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 OR13C3Q8NGS6 347 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 PROX1Q92786 737 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 ZMAT2Q96NC0 199 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 EGFL8Q99944 293 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 ATP13A3Q9H7F0 1226 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 XAB2Q9HCS7 855 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 GSN-AS1Q9NRJ2 163 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 ANAPC5Q9UJX4 755 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 MRPS28Q9Y2Q9 187 aaKnown RBP3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
TOPBP1-204ENST00000505804 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 A0A087X002 238 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 EDIL3O43854 480 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ATP6AP2O75787 350 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 QDPRP09417 244 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ZNF26P17031 533 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 LHCGRP22888 699 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 CDC25CP30307 473 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 NPY4RP50391 375 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ALDH3A2P51648 485 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 VAMP7P51809 220 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 CLDN15P56746 228 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 RASGEF1BQ0VAM2 473 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ITGA9Q13797 1035 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 TMEM187Q14656 261 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 NONOQ15233 471 aaKnown RBP eCLIP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 TEAD2Q15562 447 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 LACTB2Q53H82 288 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 XKR6Q5GH73 641 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 LCN1P1Q5VSP4 162 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ADAM5Q6NVV9 412 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 IL27RAQ6UWB1 636 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 TMEM207Q6UWW9 146 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 FAM47EQ6ZV65 393 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 MARVELD2Q8N4S9 558 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 RASGEF1AQ8N9B8 481 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 IQUBQ8NA54 791 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ZNF248Q8NDW4 579 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 OR10Q1Q8NGQ4 319 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 GMPPAQ96IJ6 420 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 GTPBP2Q9BX10 602 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 PANK2Q9BZ23 570 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 BARHL1Q9BZE3 327 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 ZMYND12Q9H0C1 365 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 PFDN4Q9NQP4 134 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 C2orf42Q9NWW7 574 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 PPP2R2CQ9Y2T4 447 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 R4GN57 208 aa3.58□□□□□ -1.84
TOPBP1-204ENST00000505804 A0A087WW49 117 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 TRAV24A0A0B4J272 114 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 ANXA2P2A6NMY6 339 aa3.57□□□□□ -1.84
TOPBP1-204ENST00000505804 EPHB6O15197 1021 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms