RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 IYDQ6PHW0 289 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 LCTLQ6UWM7 567 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 Q6ZSR9 355 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 TRPM8Q7Z2W7 1104 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 KANSL1Q7Z3B3 1105 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CLNKQ7Z7G1 428 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 MTDHQ86UE4 582 aaKnown RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 SFRP1Q8N474 314 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 FBXL6Q8N531 539 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ZBTB44Q8NCP5 570 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 OR2L8Q8NGY9 312 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 WDR20Q8TBZ3 569 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 JPH3Q8WXH2 748 aaPredicted RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 NEIL2Q969S2 332 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ZC3H10Q96K80 434 aaKnown RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 PPP1R36Q96LQ0 422 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 FERD3LQ96RJ6 166 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 CCDC106Q9BWC9 280 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 GSDMCQ9BYG8 508 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 SLC29A3Q9BZD2 475 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 MIR1-1HGQ9H1L0 117 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 XKR8Q9H6D3 395 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 TCF7L2Q9NQB0 619 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 SAR1AQ9NR31 198 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 FARSBQ9NSD9 589 aaKnown RBP10.05□□□□□ -0.8
TPM3-217ENST00000504663 GPRC5BQ9NZH0 403 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 POLG2Q9UHN1 485 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 STK38LQ9Y2H1 464 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
TPM3-217ENST00000504663 IGKV1-8A0A0C4DH67 115 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 A0A1B0GVT2 93 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SERTM1A2A2V5 107 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 NPIPB8E9PQR5 432 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 MANBAO00462 879 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 BCAT2O15382 392 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 NOBOXO60393 691 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 DIAPH2O60879 1101 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 KATNA1O75449 491 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 TBX6O95947 436 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 RPN2P04844 631 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SERPINA6P08185 405 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 JUPP14923 745 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 JUNDP17535 347 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 CSNK1EP49674 416 aaKnown RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 RAB28P51157 221 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 ILF3Q12906 894 aaKnown RBP eCLIP10.04□□□□□ -0.8
TPM3-217ENST00000504663 IFT88Q13099 833 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 CHIT1Q13231 466 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 DOC2AQ14183 400 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 ABRAXAS2Q15018 415 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 TBCCQ15814 346 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 WDR45BQ5MNZ6 344 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 PRAMEF14Q5SWL7 426 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 CATSPEREQ5SY80 951 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 LYSMD4Q5XG99 296 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 GRHL2Q6ISB3 625 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 CAPN13Q6MZZ7 669 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 LPCAT2Q7L5N7 544 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 VN1R5Q7Z5H4 357 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 MILR1Q7Z6M3 343 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 FAM129CQ86XR2 697 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 CHCHD4Q8N4Q1 142 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SNX31Q8N9S9 440 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 ZNF548Q8NEK5 533 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 MAGEC3Q8TD91 643 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SLC37A2Q8TED4 501 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 MED8Q96G25 268 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 HBEGFQ99075 208 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 SYNPO2LQ9H987 977 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 CCDC177Q9NQR7 707 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 SPHK1Q9NYA1 384 aa10.04□□□□□ -0.8
TPM3-217ENST00000504663 TDRKHQ9Y2W6 561 aaKnown RBP10.04□□□□□ -0.8
TPM3-217ENST00000504663 PI4KAP42356 2102 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ATP6AP2A0A1C7CYW4 349 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 TRPC5OSA6NMA1 111 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 E9PBE3 544 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 BTN3A3O00478 584 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 EBAG9O00559 213 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 FFAR3O14843 346 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 HGSO14964 777 aaPredicted RBP10.03□□□□□ -0.8
TPM3-217ENST00000504663 GPR42O15529 346 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 NRP2O60462 931 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 KLHL41O60662 606 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 UGDHO60701 494 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 ATP6AP2O75787 350 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 PIAS2O75928 621 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 DCTN3O75935 186 aa10.03□□□□□ -0.8
TPM3-217ENST00000504663 CLDN9O95484 217 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms