RNA–Protein interactions for RNA: ENST00000503732.1

SIL1-204, Transcript of SIL1 nucleotide exchange factor, human

TSL 3

Gene SIL1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIL1-204	ENST00000503732	SLC26A1	Q9H2B4	701 aa		13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	EPS8L2	Q9H6S3	715 aa		13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	SEMA3G	Q9NS98	782 aa		13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	INTS10	Q9NVR2	710 aa	Known RBP	13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	SOX13	Q9UN79	622 aa		13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	ANKRD12	Q6UB98	2062 aa		13.9	□□□□□ -0.18
SIL1-204	ENST00000503732	USP9Y	O00507	2555 aa	Predicted RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	HYKK	A2RU49	373 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	BLACE	A4D250	179 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	CTAGE9	A4FU28	777 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	TXNDC9	O14530	226 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	HCRTR1	O43613	425 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	ONECUT2	O95948	504 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	FMO4	P31512	558 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	RPA3	P35244	121 aa	Predicted RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	GRIA3	P42263	894 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	VSX2	P58304	361 aa	Predicted RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	AP2B1	P63010	937 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	THOC5	Q13769	683 aa	Known RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	RBBP7	Q16576	425 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	TUBB8	Q3ZCM7	444 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	WASHC2D	Q5SRD0	308 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	PRAMEF13	Q5VWM6	474 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	PRUNE1	Q86TP1	453 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	OR2L3	Q8NG85	312 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	CALML6	Q8TD86	181 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	SMPDL3A	Q92484	453 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	MFSD3	Q96ES6	412 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	IL17F	Q96PD4	163 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	PSMG3-AS1	Q96PY0	264 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	MIPEP	Q99797	713 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	MENT	Q9BUN1	341 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	XAB2	Q9HCS7	855 aa	Known RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	ZNF304	Q9HCX3	659 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	CIDEB	Q9UHD4	219 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	KLHL20	Q9Y2M5	609 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	KLK4	Q9Y5K2	254 aa		13.89	□□□□□ -0.19
SIL1-204	ENST00000503732	FITM1	A5D6W6	292 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	SDR42E2	A6NKP2	422 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	PCDH17	O14917	1159 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	MATN4	O95460	622 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	EIF2S1	P05198	315 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	MLN	P12872	115 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	CXCR2	P25025	360 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	EMP3	P54852	163 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	GPS1	Q13098	491 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	GRB7	Q14451	532 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	NKG7	Q16617	165 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	TYSND1	Q2T9J0	566 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	C4orf17	Q53FE4	359 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	NEPRO	Q6NW34	567 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	MICALCL	Q6ZW33	695 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	PPP1R32	Q7Z5V6	425 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	FAM20C	Q8IXL6	584 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	LMNTD2	Q8IXW0	634 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	OR9A1P	Q8NGU1	263 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	PRR7	Q8TB68	274 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	LKAAEAR1	Q8TD35	194 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	RERG	Q96A58	199 aa	Predicted RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	MVB12A	Q96EY5	273 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	EBNA1BP2	Q99848	306 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	ZFYVE21	Q9BQ24	234 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	ZNF552	Q9H707	407 aa	Predicted RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	MRPS30	Q9NP92	439 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	ENAM	Q9NRM1	1142 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	SYBU	Q9NX95	663 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	LUZP4	Q9P127	313 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	KLHL42	Q9P2K6	505 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	FBXL4	Q9UKA2	621 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	CRYL1	Q9Y2S2	319 aa		13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	COPG1	Q9Y678	874 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	SPTAN1	Q13813	2472 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	SNRNP200	O75643	2136 aa	Known RBP	13.88	□□□□□ -0.19
SIL1-204	ENST00000503732	CCDC88C	Q9P219	2028 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.87	□□□□□ -0.19
SIL1-204	ENST00000503732		A0A0J9YVX5	310 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	TCP11X1	B4DZS4	312 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	UMOD	P07911	640 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	UQCRH	P07919	91 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	ENO3	P13929	434 aa	Predicted RBP	13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	BDKRB1	P46663	353 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	UQCRFS1	P47985	274 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	KCNJ1	P48048	391 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	GLRB	P48167	497 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	TSTA3	Q13630	321 aa	Predicted RBP	13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	SIX1	Q15475	284 aa	Predicted RBP	13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	FCRL6	Q6DN72	434 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	NEK10	Q6ZWH5	1172 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	LPGAT1	Q92604	370 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	MIEF2	Q96C03	454 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	PBK	Q96KB5	322 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	CABS1	Q96KC9	395 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	ZNF285	Q96NJ3	590 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	BIRC8	Q96P09	236 aa		13.87	□□□□□ -0.19
SIL1-204	ENST00000503732	CRB3	Q9BUF7	120 aa		13.87	□□□□□ -0.19

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