RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TIGARQ9NQ88 270 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RAB6BQ9NRW1 208 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 AGPAT4Q9NRZ5 378 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ASH2LQ9UBL3 628 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ACOT9Q9Y305 439 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF330Q9Y3S2 320 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TIMM22Q9Y584 194 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 KCNE1BA0A087WTH5 132 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 OR6C65A6NJZ3 312 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ISM1B1AKI9 464 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TBX1O43435 398 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NDUFA2O43678 99 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SYNCRIPO60506 623 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 UGDHO60701 494 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRDM1O75626 825 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF682O95780 498 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 LGI1O95970 557 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CPN2P22792 545 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MAOBP27338 520 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GSTM5P46439 218 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MARCKSL1P49006 195 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TPMTP51580 245 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ERVK-21P61565 698 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRKCEQ02156 737 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF528Q3MIS6 628 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 UNC5DQ6UXZ4 953 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TMPRSS11AQ6ZMR5 421 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ALYREFQ86V81 257 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SPAG16Q8N0X2 631 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 VWA5B2Q8N398 1253 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CYGBQ8WWM9 190 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PTP4A1Q93096 173 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM80Q96HE8 168 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PLIN2Q99541 437 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CINPQ9BW66 212 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FUNDC2Q9BWH2 189 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 BTBD2Q9BX70 525 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PINK1Q9BXM7 581 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TRIT1Q9H3H1 467 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FARSBQ9NSD9 589 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 UBP1Q9NZI7 540 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 AGO2Q9UKV8 859 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 POLHQ9Y253 713 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 KCNK1O00180 336 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TOR1AO14656 332 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SLC16A6O15403 523 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FTH1P02794 183 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 AMHP03971 560 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ITGB1P05556 798 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CRHBPP24387 322 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GABRB3P28472 473 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RYKP34925 604 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NUP62P37198 522 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GDI2P50395 445 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ATP6AP1Q15904 470 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 NRF1Q16656 503 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PTPRNQ16849 979 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 PTPN20Q4JDL3 420 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TEX30Q5JUR7 227 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TPRG1LQ5T0D9 272 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 N4BP2L1Q5TBK1 243 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FAM205BPQ63HN1 556 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF111Q6ZNA4 994 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF704Q6ZNC4 412 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF130Q86XS8 419 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 GPALPP1Q8IXQ4 340 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RNF113BQ8IZP6 322 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KRT78Q8N1N4 520 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 L3MBTL4Q8NA19 623 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 BPIFB6Q8NFQ5 453 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DBF4BQ8NFT6 615 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 UTP15Q8TED0 518 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 STYXQ8WUJ0 223 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ATG4AQ8WYN0 398 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SNAPC3Q92966 411 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FUBP1Q96AE4 644 aaKnown RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CLIP3Q96DZ5 547 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 OPALINQ96PE5 141 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DDOQ99489 341 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TBCDQ9BTW9 1192 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ZSCAN5AQ9BUG6 496 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 FLRT1Q9NZU1 646 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM181Q9P2C4 612 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 EXTL2Q9UBQ6 330 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 LEF1Q9UJU2 399 aaPredicted RBP2.71□□□□□ -1.98
NEDD4-204ENST00000503468 DNPEPQ9ULA0 475 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 SCML2Q9UQR0 700 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MAB21L2Q9Y586 359 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MAU2Q9Y6X3 613 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 MCIDASD6RGH6 385 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 RGS5O15539 181 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KCNN4O15554 427 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 KCNJ13O60928 360 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ADAM11O75078 769 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 VPS26AO75436 327 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 TNFRSF21O75509 655 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 OR7A10O76100 309 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 CDK14O94921 469 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ANGPTL1O95841 491 aa2.71□□□□□ -1.98
NEDD4-204ENST00000503468 ATXN1LP0C7T5 689 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms