RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 ZNF501Q96CX3 271 aaPredicted RBP13.87□□□□□ -0.19
CLDND1-206ENST00000502299 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 PKP4Q99569 1192 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 CPNE1Q99829 537 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 ARHGAP9Q9BRR9 750 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 ULBP3Q9BZM4 244 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 CHRNA10Q9GZZ6 450 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 KLHL25Q9H0H3 589 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
CLDND1-206ENST00000502299 SERTAD3Q9UJW9 196 aa13.87□□□□□ -0.19
CLDND1-206ENST00000502299 CXorf49A8MYA2 514 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 PRICKLE3O43900 615 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SYF2O95926 243 aaKnown RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 MT-ND3P03897 115 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 HIST1H2AGP0C0S8 130 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 ERGP11308 486 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 HIST1H2ADP20671 130 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 CYP2A7P20853 494 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SAT1P21673 171 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 GP5P40197 560 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SLC12A2P55011 1212 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SP140Q13342 867 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 GPR19Q15760 415 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 MANEAQ5SRI9 462 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 GRTP1Q5TC63 336 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 ATG14Q6ZNE5 492 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 TRIM73Q86UV7 250 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 TAX1BP1Q86VP1 789 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 CTAGE3PQ8IX95 158 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 CACNA2D3Q8IZS8 1091 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 NKAPQ8N5F7 415 aaKnown RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 ESX1Q8N693 406 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 IL22RA1Q8N6P7 574 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 C19orf47Q8N9M1 422 aaKnown RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 FBF1Q8TES7 1133 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 ZUFSPQ96AP4 578 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 LINGO1Q96FE5 620 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
CLDND1-206ENST00000502299 HIST1H2AHQ96KK5 128 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 OLFM1Q99784 485 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 HIST1H2AJQ99878 128 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 MCMBPQ9BTE3 642 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 H2AFJQ9BTM1 129 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 SLC12A9Q9BXP2 914 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 PARVBQ9HBI1 364 aa13.86□□□□□ -0.19
CLDND1-206ENST00000502299 TARM1B6A8C7 271 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 PIAS1O75925 651 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 DLGAP3O95886 979 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 CCNYL3P0C7X3 344 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 PHBP35232 272 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 SPRP35270 261 aaPredicted RBP13.85□□□□□ -0.19
CLDND1-206ENST00000502299 PNLIPRP1P54315 467 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 TAS2R39P59534 338 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 POU4F1Q01851 419 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 NAB1Q13506 487 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 FASTKQ14296 549 aaKnown RBP13.85□□□□□ -0.19
CLDND1-206ENST00000502299 NAA25Q14CX7 972 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 KBTBD12Q3ZCT8 623 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 COLEC12Q5KU26 742 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 PWWP2BQ6NUJ5 590 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 C6orf15Q6UXA7 325 aaPredicted RBP13.85□□□□□ -0.19
CLDND1-206ENST00000502299 CDHR3Q6ZTQ4 885 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 TIPARPQ7Z3E1 657 aaKnown RBP13.85□□□□□ -0.19
CLDND1-206ENST00000502299 SPNS2Q8IVW8 549 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 LMNTD1Q8N9Z9 388 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 OR2A1Q8NGT9 310 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 ANKRD7Q92527 254 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 CCDC138Q96M89 665 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 FMO2Q99518 471 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 RBBP8Q99708 897 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 TRIM54Q9BYV2 358 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 POPDC3Q9HBV1 291 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 FAM60AQ9NP50 221 aa13.85□□□□□ -0.19
CLDND1-206ENST00000502299 RELNP78509 3460 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 A0A1W2PPV9 198 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 KRT87PA6NCN2 255 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 PABPN1LA6NDY0 278 aaKnown RBP13.84□□□□□ -0.19
CLDND1-206ENST00000502299 TMEM150CB9EJG8 249 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 SCRG1O75711 98 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 TSPAN12O95859 305 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 SLC16A8O95907 504 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 C1QAP02745 245 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-206ENST00000502299 ZNF28P17035 718 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 MAGP20916 626 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 CMPK1P30085 196 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 RPA3P35244 121 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-206ENST00000502299 ABHD18Q0P651 414 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 ZIC1Q15915 447 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 ZC3H12BQ5HYM0 836 aaKnown RBP13.84□□□□□ -0.19
CLDND1-206ENST00000502299 FIGLAQ6QHK4 219 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 TMEM126BQ8IUX1 230 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 FAM20CQ8IXL6 584 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
CLDND1-206ENST00000502299 DNAJC22Q8N4W6 341 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms