RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 SBK3P0C264 359 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 CREB1P16220 341 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 POLR2CP19387 275 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 IMPDH1P20839 514 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 CD1CP29017 333 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 SERPINB5P36952 375 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 TRA2AQ13595 282 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 AMZ1Q400G9 498 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 SPESP1Q6UW49 350 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 MBOAT1Q6ZNC8 495 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 ZNF761Q86XN6 746 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 KMT5CQ86Y97 462 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 LMNTD1Q8N9Z9 388 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 DEFB124Q8NES8 71 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 OR4D9Q8NGE8 314 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 NCSTNQ92542 709 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 RSC1A1Q92681 617 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 L3HYPDHQ96EM0 354 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 TMEM74Q96NL1 305 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 ATG10Q9H0Y0 220 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 C1GALT1Q9NS00 363 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 OXSMQ9NWU1 459 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 MYO15AQ9UKN7 3530 aa16.97■□□□□ 0.31
CTDSP1-215ENST00000498160 A0A0J9YY10 115 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 G3V2L1 256 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 CLGNO14967 610 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 DLX3O60479 287 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 DHRS4L1P0CG22 281 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 MYF5P13349 255 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 EPB42P16452 691 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TYRP1P17643 537 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 GNAZP19086 355 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 NR1D1P20393 614 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 HPDP32754 393 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 CCL7P80098 99 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PRDX1Q06830 199 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 CDC16Q13042 620 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 SF1Q15637 639 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PDK4Q16654 411 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 ICE2Q659A1 982 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 IRGCQ6NXR0 463 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 CYB5D1Q6P9G0 228 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 THOC6Q86W42 341 aaKnown RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 C17orf64Q86WR6 236 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 SPNS2Q8IVW8 549 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TBC1D19Q8N5T2 526 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 RAB3IL1Q8TBN0 382 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PHF21BQ96EK2 531 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TMEM79Q9BSE2 394 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TRMOQ9BU70 441 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 PITHD1Q9GZP4 211 aaPredicted RBP16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 OGFRQ9NZT2 677 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 SLC17A7Q9P2U7 560 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 TAC3Q9UHF0 121 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 KLK4Q9Y5K2 254 aa16.96■□□□□ 0.31
CTDSP1-215ENST00000498160 D6RAR5 112 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CAPN5O15484 640 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 TAPBPO15533 448 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PRICKLE3O43900 615 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 UGDHO60701 494 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 MLYCDO95822 493 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 BPGMP07738 259 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 RPS17P08708 135 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 ANKRD34CP0C6C1 535 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 UGT2B7P16662 529 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CDH3P22223 829 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CXCR2P25025 360 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 EEF1DP29692 281 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PRDX3P30048 256 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 SERPINB4P48594 390 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 HSPA7P48741 367 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 NOVA1P51513 510 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PCDH1Q08174 1060 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 FASTKQ14296 549 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PCLAFQ15004 111 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CFAP157Q5JU67 520 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 RBM44Q6ZP01 1051 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CACTIN-AS1Q8N1I8 211 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 ANKRD42Q8N9B4 389 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 OR2L3Q8NG85 312 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 OR2A1Q8NGT9 310 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 JPH3Q8WXH2 748 aaPredicted RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 ZUFSPQ96AP4 578 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 OR2A14Q96R47 310 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PITPNM3Q9BZ71 974 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CHRNA10Q9GZZ6 450 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 EHD1Q9H4M9 534 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PELI2Q9HAT8 420 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 MRPS30Q9NP92 439 aaKnown RBP16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 SEMA5BQ9P283 1151 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 PDP2Q9P2J9 529 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 CIDEBQ9UHD4 219 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 SNX7Q9UNH6 387 aa16.95■□□□□ 0.3
CTDSP1-215ENST00000498160 DMDP11532 3685 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms