RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	EPCAM	P16422	314 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	MAGEA11	P43364	429 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	NR0B1	P51843	470 aa	Known RBP	5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	HERV-K104	P61576	105 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	GCNT1	Q02742	428 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	KLC1	Q07866	573 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	ZNF273	Q14593	569 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	NPTX1	Q15818	432 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	TMEM178A	Q8NBL3	297 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	OR13C3	Q8NGS6	347 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	OR2T11	Q8NH01	316 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	PRAC1	Q96KF2	57 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	RMDN2	Q96LZ7	410 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	CCDC3	Q9BQI4	270 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	KATNB1	Q9BVA0	655 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	GTPBP2	Q9BX10	602 aa	Known RBP	5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	TLE6	Q9H808	572 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	XAB2	Q9HCS7	855 aa	Known RBP	5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	DNAJC4	Q9NNZ3	241 aa		5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.1	□□□□□ -1.59
TRA2A-210	ENST00000497730	KRT86	O43790	486 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	EDIL3	O43854	480 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	HSPA4L	O95757	839 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	GSR	P00390	522 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	GPI	P06744	558 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	FAM157C	P0CG43	387 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	NPY4R	P50391	375 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	KRT81	Q14533	505 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	TMEM30B	Q3MIR4	351 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	SLC35D3	Q5M8T2	416 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	SUSD1	Q6UWL2	747 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	FAM47E	Q6ZV65	393 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	KIRREL3	Q8IZU9	778 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	NDUFAF2	Q8N183	169 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	RYBP	Q8N488	228 aa	Predicted RBP	5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	ZNF248	Q8NDW4	579 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	OR10Q1	Q8NGQ4	319 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	TMEM190	Q8WZ59	177 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	PROX1	Q92786	737 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	ZMYND12	Q9H0C1	365 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	SHARPIN	Q9H0F6	387 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	CPVL	Q9H3G5	476 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	FN3K	Q9H479	309 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	CHST11	Q9NPF2	352 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	KCNK7	Q9Y2U2	307 aa		5.09	□□□□□ -1.59
TRA2A-210	ENST00000497730	IGHV4-4	A0A075B6R2	117 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	CASTOR2	A6NHX0	329 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	KLF11	O14901	512 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	RPS6KA5	O75582	802 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	PAK4	O96013	591 aa	Predicted RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	QDPR	P09417	244 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	CD27	P26842	260 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	ALDH3A2	P51648	485 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	VAMP7	P51809	220 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	ATP12A	P54707	1039 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	RASGEF1A	Q8N9B8	481 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	ZMAT2	Q96NC0	199 aa	Known RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	GBP5	Q96PP8	586 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	EGFL8	Q99944	293 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	RBM4	Q9BWF3	364 aa	Known RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	BARHL1	Q9BZE3	327 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	ZCCHC17	Q9NP64	241 aa	Known RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	PPAN	Q9NQ55	473 aa	Known RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	GSN-AS1	Q9NRJ2	163 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	GRID1	Q9ULK0	1009 aa		5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	MRPS28	Q9Y2Q9	187 aa	Known RBP	5.08	□□□□□ -1.6
TRA2A-210	ENST00000497730	DISP3	Q9P2K9	1392 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	PSMD14	O00487	310 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	SNX3	O60493	162 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	EIF5B	O60841	1220 aa	Known RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	AP2A2	O94973	939 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	RAF1	P04049	648 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	MYL6B	P14649	208 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	ACAT1	P24752	427 aa	Known RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	ALDH4A1	P30038	563 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	CDC25C	P30307	473 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	LBX1	P52954	281 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	SNRPD1	P62314	119 aa	Known RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	DLK1	P80370	383 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	HNRNPD	Q14103	355 aa	Known RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	NONO	Q15233	471 aa	Known RBP eCLIP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	OR4A47	Q6IF82	309 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	ENPP7	Q6UWV6	458 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	VSIG1	Q86XK7	387 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	FAM219A	Q8IW50	185 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	THNSL1	Q8IYQ7	743 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	KLHDC1	Q8N7A1	406 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	NIPA2	Q8N8Q9	360 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	DDHD1	Q8NEL9	900 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	CTCFL	Q8NI51	663 aa	Predicted RBP	5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	SPATA33	Q96N06	139 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	MGME1	Q9BQP7	344 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	C2orf42	Q9NWW7	574 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	MDFIC	Q9P1T7	246 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730	EPHA6	Q9UF33	1036 aa		5.07	□□□□□ -1.6
TRA2A-210	ENST00000497730		A0A087WW49	117 aa		5.06	□□□□□ -1.6
TRA2A-210	ENST00000497730	ARHGEF37	A1IGU5	675 aa		5.06	□□□□□ -1.6
TRA2A-210	ENST00000497730	ANXA2P2	A6NMY6	339 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms