RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ANKRD20A3Q5VUR7 823 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 TXNRD3NBQ6F5E7 133 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 Q6ZTC4 211 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 ZNF771Q7L3S4 317 aaPredicted RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 HOOK3Q86VS8 718 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 AMIGO1Q86WK6 493 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 TMEM139Q8IV31 216 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 NUP93Q8N1F7 819 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 DNAJC22Q8N4W6 341 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 NHLRC2Q8NBF2 726 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 NOA1Q8NC60 698 aaKnown RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 SLC24A4Q8NFF2 622 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 GRHL3Q8TE85 626 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 AFAP1L1Q8TED9 768 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 PHLDA1Q8WV24 401 aaPredicted RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 DNASE2BQ8WZ79 361 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 FAM71F1Q96KD3 344 aaPredicted RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 DESI2Q9BSY9 194 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 URM1Q9BTM9 101 aaKnown RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 MTMR12Q9C0I1 747 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 SNX25Q9H3E2 840 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 Q9H8V8 135 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 DONSONQ9NYP3 566 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 TAAR2Q9P1P5 351 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 CACNG4Q9UBN1 327 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 WDR83OSQ9Y284 106 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
SMC4-225ENST00000497203 GREB1LQ9C091 1923 aaPredicted RBP3.71□□□□□ -1.82
SMC4-225ENST00000497203 A0A1W2PPK0 400 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 C2orf81A6NN90 581 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 YDJCA8MPS7 323 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 O00370 1275 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ARPC2O15144 300 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 FGF17O60258 216 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ATP6AP2O75787 350 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 GSRP00390 522 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 CRYAAP02489 173 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 IGHV4-38-2P0DP08 117 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LIFP15018 202 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PAX1P15863 534 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 EFNA1P20827 205 aaPredicted RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 CDH3P22223 829 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 CA6P23280 308 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 MAZP56270 477 aaKnown RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 CLDN15P56746 228 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PHLDA2Q53GA4 152 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LACTB2Q53H82 288 aaPredicted RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 SPDYCQ5MJ68 293 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 CASC4Q6P4E1 433 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 C15orf39Q6ZRI6 1047 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LINC00696Q6ZRV3 163 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 OTOAQ7RTW8 1153 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PIWIL3Q7Z3Z3 882 aaKnown RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 UNC45BQ8IWX7 931 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 MMD2Q8IY49 270 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LGI2Q8N0V4 545 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ANKRD13CQ8N6S4 541 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 KBTBD3Q8NAB2 608 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 OR11H4Q8NGC9 324 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 OR52N5Q8NH56 324 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 CTCFLQ8NI51 663 aaPredicted RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 FIBINQ8TAL6 211 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 SLC26A7Q8TE54 656 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 GRK7Q8WTQ7 553 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PGM2Q96G03 612 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 BSCL2Q96G97 398 aaPredicted RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 AK8Q96MA6 479 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 FAM20AQ96MK3 541 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PARK7Q99497 189 aaKnown RBP3.7□□□□□ -1.82
SMC4-225ENST00000497203 RHNO1Q9BSD3 238 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 SLC2A11Q9BYW1 496 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LAT2Q9GZY6 243 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ZMYND12Q9H0C1 365 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LMAN1LQ9HAT1 526 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 PELI2Q9HAT8 420 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ABCB8Q9NUT2 735 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 FLRT3Q9NZU0 649 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 ACAD8Q9UKU7 415 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 IGSF1Q8N6C5 1336 aa3.7□□□□□ -1.82
SMC4-225ENST00000497203 LOC101059948A0A1B0GTJ6 334 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 FAM172BPA6NC97 362 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 CASTOR2A6NHX0 329 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 PPIP5K2O43314 1243 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 FCGR3BO75015 233 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 CA4P22748 312 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 MARK3P27448 753 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 TIA1P31483 386 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC4-225ENST00000497203 GMPSP49915 693 aaPredicted RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 VAMP7P51809 220 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 PTENP60484 403 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 HERV-K104P61576 105 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 NFE2L1Q14494 772 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 MORF4L2Q15014 288 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 CTU2Q2VPK5 515 aaKnown RBP3.69□□□□□ -1.82
SMC4-225ENST00000497203 TECRLQ5HYJ1 363 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 DCAF10Q5QP82 559 aa3.69□□□□□ -1.82
SMC4-225ENST00000497203 OR4A47Q6IF82 309 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms