RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 CASC4Q6P4E1 433 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 ZNF662Q6ZS27 426 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 SHISA6Q6ZSJ9 500 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 PRELID2Q8N945 189 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 TRIM58Q8NG06 486 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 DENND1AQ8TEH3 1009 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 FKBP10Q96AY3 582 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 BIRC8Q96P09 236 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 HOMER3Q9NSC5 361 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 C5AR2Q9P296 337 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 CDC23Q9UJX2 597 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 FBXL4Q9UKA2 621 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 CRYL1Q9Y2S2 319 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 FAM169AQ9Y6X4 670 aa12.41□□□□□ -0.42
FN1-226ENST00000496542 POLEQ07864 2286 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 A0A0J9YVX5 310 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 H3BMM5 538 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 AGPSO00116 658 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 PRICKLE3O43900 615 aaPredicted RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 NRP2O60462 931 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 AVILO75366 819 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 FKBP9O95302 570 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 PIM1P11309 404 aaPredicted RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 CHRM3P20309 590 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 ITGA3P26006 1051 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 OR1D4P47884 311 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 YOD1Q5VVQ6 348 aaPredicted RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 ANKRD22Q5VYY1 191 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 KIAA0930Q6ICG6 404 aaPredicted RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 COX15Q7KZN9 410 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 OVCH1Q7RTY7 1134 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 DTWD1Q8N5C7 304 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 OR2L3Q8NG85 312 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 ZUFSPQ96AP4 578 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 PSMG3-AS1Q96PY0 264 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 TCF12Q99081 682 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 TRIM56Q9BRZ2 755 aaKnown RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 ACAT2Q9BWD1 397 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 SLC29A3Q9BZD2 475 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
FN1-226ENST00000496542 WDR54Q9H977 334 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 LRRC4CQ9HCJ2 640 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 ATP13A2Q9NQ11 1180 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 IL1RAPL1Q9NZN1 696 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 SPATA7Q9P0W8 599 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 SAMD15Q9P1V8 674 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 CTSFQ9UBX1 484 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 MAU2Q9Y6X3 613 aa12.4□□□□□ -0.42
FN1-226ENST00000496542 TEX15Q9BXT5 2789 aa12.4□□□□□ -0.43
FN1-226ENST00000496542 DIDO1Q9BTC0 2240 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 NBPF19A0A087WUL8 3843 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 A0A1W2PPV9 198 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ARHGEF33A8MVX0 844 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 TCP11X1B4DZS4 312 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 E5RI56 91 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 KLHL41O60662 606 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 KRT14P02533 472 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ALBP02768 609 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ESR1P03372 595 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 EIF2S1P05198 315 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 F7P08709 466 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 PAMP19021 973 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 OGNP20774 298 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 MMP11P24347 488 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ATP5DP30049 168 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 SARNPP82979 210 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 AIMP2Q13155 320 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 TSTA3Q13630 321 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 FASTKQ14296 549 aaKnown RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 NKG7Q16617 165 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 PLEKHN1Q494U1 663 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 ACSBG2Q5FVE4 666 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 WASHC2DQ5SRD0 308 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ZNF470Q6ECI4 717 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 FRMPD2BQ6IN97 320 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 NEPROQ6NW34 567 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 IQCKQ8N0W5 287 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 HMGCLL1Q8TB92 370 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 TM9SF4Q92544 642 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ZNF669Q96BR6 464 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ZNF285Q96NJ3 590 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 SPSB2Q99619 263 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 ILKAPQ9H0C8 392 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 ZNF552Q9H707 407 aaPredicted RBP12.39□□□□□ -0.43
FN1-226ENST00000496542 SLC6A20Q9NP91 592 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 GALPQ9UBC7 116 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 B3GNT3Q9Y2A9 372 aa12.39□□□□□ -0.43
FN1-226ENST00000496542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 LOC105369274A0A096LPK9 316 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 LOC102723532A0A0G2JNH3 316 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 HYKKA2RU49 373 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 FITM1A5D6W6 292 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 SOCS6O14544 535 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 SRPX2O60687 465 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms