RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	MAD1L1	Q9Y6D9	718 aa		13.86	□□□□□ -0.19
CXCL12-208	ENST00000496375	AP1M2	Q9Y6Q5	423 aa		13.86	□□□□□ -0.19
CXCL12-208	ENST00000496375	SHANK1	Q9Y566	2161 aa		13.86	□□□□□ -0.19
CXCL12-208	ENST00000496375	SPTAN1	Q13813	2472 aa	Known RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375		F8W8V4	182 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375		H3BMH7	237 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	OR1I1	O60431	355 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	BANF1	O75531	89 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	KLF7	O75840	302 aa	Predicted RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CTSB	P07858	339 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	ELK3	P41970	407 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CSE1L	P55060	971 aa	Known RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	PLOD1	Q02809	727 aa	Predicted RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	RAPSN	Q13702	412 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	BBS9	Q3SYG4	887 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	RHBDD2	Q6NTF9	364 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CENPU	Q71F23	418 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	GALNT7	Q86SF2	657 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CALML6	Q8TD86	181 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	PWWP2A	Q96N64	755 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	C17orf62	Q9BQA9	187 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CARD6	Q9BX69	1037 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	CHRNA10	Q9GZZ6	450 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	ZDHHC18	Q9NUE0	388 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	GPN3	Q9UHW5	284 aa	Predicted RBP	13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	VPS9D1	Q9Y2B5	631 aa		13.85	□□□□□ -0.19
CXCL12-208	ENST00000496375	ISM1	B1AKI9	464 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	PFDN6	O15212	129 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	ZSCAN9	O15535	394 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	PEBP1	P30086	187 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	KIR2DS3	Q14952	304 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	INPP5J	Q15735	1006 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	KYNU	Q16719	465 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	PRR30	Q53SZ7	412 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	FHL5	Q5TD97	284 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	SLC6A19	Q695T7	634 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	MRGPRE	Q86SM8	312 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	LDB1	Q86U70	411 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	HPS6	Q86YV9	775 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	ZNF655	Q8N720	491 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375		Q8NA96	180 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	FBXO25	Q8TCJ0	367 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	PROKR1	Q8TCW9	393 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	BIRC8	Q96P09	236 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	GBP5	Q96PP8	586 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	SMAD5	Q99717	465 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	FAM167B	Q9BTA0	163 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	LRRC4C	Q9HCJ2	640 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	SLAMF7	Q9NQ25	335 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	TXLNG	Q9NUQ3	528 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	IRAK4	Q9NWZ3	460 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	IFT80	Q9P2H3	777 aa	Predicted RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	DHCR7	Q9UBM7	475 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	CHMP2B	Q9UQN3	213 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	PTRH2	Q9Y3E5	179 aa	Known RBP	13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	ESPL1	Q14674	2120 aa		13.84	□□□□□ -0.19
CXCL12-208	ENST00000496375	SPTBN1	Q01082	2364 aa	Known RBP	13.83	□□□□□ -0.19
CXCL12-208	ENST00000496375	ICE1	Q9Y2F5	2266 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	KDM1A	O60341	852 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	NDUFS3	O75489	264 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	AGFG2	O95081	481 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	S1PR4	O95977	384 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	ESR1	P03372	595 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	PKLR	P30613	574 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	CCR7	P32248	378 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	FOLR3	P41439	243 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	DCD	P81605	110 aa	Known RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	PDIA2	Q13087	525 aa	Known RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	THOC5	Q13769	683 aa	Known RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	SSPN	Q14714	243 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	SLC9A5	Q14940	896 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	FASTKD3	Q14CZ7	662 aa	Known RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	TRADD	Q15628	312 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	SLC5A12	Q1EHB4	618 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	ZNF470	Q6ECI4	717 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	KIAA0408	Q6ZU52	694 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	CYS1	Q717R9	158 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	KCNMB4	Q86W47	210 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	FAM20C	Q8IXL6	584 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	DNAJC22	Q8N4W6	341 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	FBXO36	Q8NEA4	188 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	CERS2	Q96G23	380 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	IP6K3	Q96PC2	410 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	TSSK1B	Q9BXA7	367 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	MOCS1	Q9NZB8	636 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	NDOR1	Q9UHB4	597 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	DMGDH	Q9UI17	866 aa	Known RBP	13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	GNPTG	Q9UJJ9	305 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	SRPK3	Q9UPE1	567 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	PLCL2	Q9UPR0	1127 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	CDYL	Q9Y232	598 aa		13.83	□□□□□ -0.2
CXCL12-208	ENST00000496375	GOLGA8K	D6RF30	607 aa		13.82	□□□□□ -0.2
CXCL12-208	ENST00000496375		H3BMM5	538 aa		13.82	□□□□□ -0.2
CXCL12-208	ENST00000496375	GOLGA8T	H3BQL2	631 aa		13.82	□□□□□ -0.2
CXCL12-208	ENST00000496375	PEX12	O00623	359 aa		13.82	□□□□□ -0.2

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