RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 APOOQ9BUR5 198 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 EBF2Q9HAK2 575 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 MRPL40Q9NQ50 206 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 SLAMF8Q9P0V8 285 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 GMPR2Q9P2T1 348 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 PLAGL1Q9UM63 463 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 COLQQ9Y215 455 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 NCKAP1Q9Y2A7 1128 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 DLGAP4Q9Y2H0 992 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 WDR37Q9Y2I8 494 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 PLEKHM1Q9Y4G2 1056 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 CFAP20Q9Y6A4 193 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 KCNE2Q9Y6J6 123 aa13.25□□□□□ -0.29
SPTBN1-205ENST00000496323 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 H0YIV9 168 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CLGNO14967 610 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 BCKDHAP12694 445 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 ACP5P13686 325 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 PNLIPRP1P54315 467 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 SESN3P58005 492 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 TFF2Q03403 129 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 DMPKQ09013 629 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 MAD2L1Q13257 205 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CAPRIN1Q14444 709 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 RNF111Q6ZNA4 994 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 SLC26A7Q8TE54 656 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 JADE3Q92613 823 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 HOPXQ9BPY8 73 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 C1QTNF7Q9BXJ2 289 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 BTBD1Q9H0C5 482 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 GPRC5BQ9NZH0 403 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 MMP17Q9ULZ9 603 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 POM121BA6NF01 834 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 PRR19A6NJB7 356 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 FKBP6O75344 327 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 ACADMP11310 421 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 GABRG2P18507 467 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 SLC6A2P23975 617 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 GCKP35557 465 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 HNF4AP41235 474 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 DGKQP52824 942 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CLDN2P57739 230 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 PYCR3Q53H96 274 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CATSPEREQ5SY80 951 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 AAGABQ6PD74 315 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 Q6ZS52 159 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 DCUN1D3Q8IWE4 304 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 SLC15A3Q8IY34 581 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 KRTCAP2Q8N6L1 136 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 OR5K2Q8NHB8 316 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 ASB12Q8WXK4 309 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 MENTQ9BUN1 341 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 ABCD2Q9UBJ2 740 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 CA5BQ9Y2D0 317 aa13.24□□□□□ -0.29
SPTBN1-205ENST00000496323 IFRD1O00458 451 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 NME4O00746 187 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 ANPEPP15144 967 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 CLCNKAP51800 687 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 AP2B1P63010 937 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TSTA3Q13630 321 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 FLOT2Q14254 428 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SKIV2LQ15477 1246 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 CACHD1Q5VU97 1274 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.294e-7■□□□□ 8.2
SPTBN1-205ENST00000496323 RAD51AP1Q96B01 352 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 MTERF1Q99551 399 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TACO1Q9BSH4 297 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TRIM8Q9BZR9 551 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 PCDHAC1Q9H158 963 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 GID8Q9NWU2 228 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SUCOQ9UBS9 1254 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 EBF1Q9UH73 591 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 LEF1Q9UJU2 399 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SUFUQ9UMX1 484 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 KCNK6Q9Y257 313 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 ATG2BQ96BY7 2078 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 A0A1W2PPC1 479 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 KLHL33A6NCF5 533 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 H3BNX3 289 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 ERGP11308 486 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SRFP11831 508 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 AMD1P17707 334 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 KELP23276 732 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TACR1P25103 407 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 ATXN3P54252 364 aaPredicted RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 NFYCQ13952 458 aa13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SMAD2Q15796 467 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-205ENST00000496323 SAMD4BQ5PRF9 694 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms