RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MYO18BQ8IUG5 2567 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 GOLGA6L10A0A0M3HER8 536 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ZCWPW2A0A1B0GU75 182 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 A0A1W2PPV9 198 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FITM1A5D6W6 292 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ZNF839A8K0R7 811 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 CTSVO60911 334 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 PHF2O75151 1096 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 VPS4BO75351 444 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 PSIP1O75475 530 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 CATP04040 527 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 MCM3P25205 808 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 CD97P48960 835 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FNTAP49354 379 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 VSX2P58304 361 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 CTBP1Q13363 440 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 UBAP2LQ14157 1087 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FASTKQ14296 549 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ARHGAP19Q14CB8 494 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 LONRF1Q17RB8 773 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 TTLL9Q3SXZ7 439 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 NADK2Q4G0N4 442 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ZNF470Q6ECI4 717 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FBXO42Q6P3S6 717 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 NEK10Q6ZWH5 1172 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 MRGPREQ86SM8 312 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 PPIL6Q8IXY8 311 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 SLC35F6Q8N357 371 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 NAT8LQ8N9F0 302 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 OR2L3Q8NG85 312 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 COG1Q8WTW3 980 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 INPP5DQ92835 1189 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FKBP10Q96AY3 582 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 SMAD5Q99717 465 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 TRIM56Q9BRZ2 755 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 NUDT9Q9BW91 350 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FBXO6Q9NRD1 293 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 SLC22A11Q9NSA0 550 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 C20orf96Q9NUD7 363 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 P4HTMQ9NXG6 502 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.45
PTPRF-214ENST00000496043 VPS4AQ9UN37 437 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 COMMD10Q9Y6G5 202 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 FAM169AQ9Y6X4 670 aa12.21□□□□□ -0.45
PTPRF-214ENST00000496043 TENM4Q6N022 2769 aa12.21□□□□□ -0.46
PTPRF-214ENST00000496043 BSNQ9UPA5 3926 aa12.21□□□□□ -0.46
PTPRF-214ENST00000496043 A0A0J9YVX5 310 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 HYKKA2RU49 373 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 CES2O00748 559 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 ZBTB14O43829 449 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 KIF5CO60282 957 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
PTPRF-214ENST00000496043 UMODP07911 640 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 PSMB5P28074 263 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 RPA3P35244 121 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-214ENST00000496043 CLCN7P51798 805 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 DCAF10Q5QP82 559 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 DENND6AQ8IWF6 608 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 GALNT16Q8N428 558 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 CPT1CQ8TCG5 803 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 PKP4Q99569 1192 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 DPH7Q9BTV6 452 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 ACAT2Q9BWD1 397 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 MFRPQ9BY79 579 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 WDR54Q9H977 334 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
PTPRF-214ENST00000496043 SLAMF7Q9NQ25 335 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
PTPRF-214ENST00000496043 DHRS7Q9Y394 339 aa12.2□□□□□ -0.46
PTPRF-214ENST00000496043 MED13Q9UHV7 2174 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 LOC105369274A0A096LPK9 316 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 LOC102723532A0A0G2JNH3 316 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 ARHGEF33A8MVX0 844 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 AGPSO00116 658 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 MYO1CO00159 1063 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 HAUS5O94927 633 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 ALPPP05187 535 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 EIF2S1P05198 315 aaKnown RBP12.19□□□□□ -0.46
PTPRF-214ENST00000496043 MPC1LP0DKB6 136 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 ERGP11308 486 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 ENO3P13929 434 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-214ENST00000496043 MMP11P24347 488 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 VARSP26640 1264 aaKnown RBP12.19□□□□□ -0.46
PTPRF-214ENST00000496043 MAGEA3P43357 314 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 OR1D4P47884 311 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 PNLIPRP1P54315 467 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 SOX8P57073 446 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 PRDX1Q06830 199 aaKnown RBP12.19□□□□□ -0.46
PTPRF-214ENST00000496043 TSTA3Q13630 321 aaPredicted RBP12.19□□□□□ -0.46
PTPRF-214ENST00000496043 RAPSNQ13702 412 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 MYBPC3Q14896 1274 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 PPP1R7Q15435 360 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 NKG7Q16617 165 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 VWA5B1Q5TIE3 1220 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 FRMPD2BQ6IN97 320 aa12.19□□□□□ -0.46
PTPRF-214ENST00000496043 JMJD6Q6NYC1 403 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms