RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 NXNL1Q96CM4 212 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 SGK494Q96LW2 274 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 OLFM1Q99784 485 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 LMF2Q9BU23 707 aaKnown RBP3.15□□□□□ -1.91
VPS50-219ENST00000495039 CENPOQ9BU64 300 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 PITPNM3Q9BZ71 974 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 WNT5BQ9H1J7 359 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 EQTNQ9NQ60 294 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 ABCB10Q9NRK6 738 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 OSER1Q9NX31 292 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 DPP3Q9NY33 737 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 HAO2Q9NYQ3 351 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 TUBE1Q9UJT0 475 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 ANAPC2Q9UJX6 822 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 CELA1Q9UNI1 258 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 WDR37Q9Y2I8 494 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 NME7Q9Y5B8 376 aa3.15□□□□□ -1.91
VPS50-219ENST00000495039 A0A1W2PRB8 838 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 HYKKA2RU49 373 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 MEIS2O14770 477 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 C22orf31O95567 290 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TRUB2O95900 331 aaKnown RBP3.14□□□□□ -1.91
VPS50-219ENST00000495039 LINGO3P0C6S8 592 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 CCR3P51677 355 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 ZNF75DP51815 510 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TPD52P55327 224 aaPredicted RBP3.14□□□□□ -1.91
VPS50-219ENST00000495039 GSDMDP57764 484 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 DLK1P80370 383 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 LGALS3BPQ08380 585 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 HSPB3Q12988 150 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 ALCAMQ13740 583 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 LETM2Q2VYF4 491 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 RNASEH2BQ5TBB1 312 aaKnown RBP3.14□□□□□ -1.91
VPS50-219ENST00000495039 C6orf163Q5TEZ5 329 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 CORO6Q6QEF8 472 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 LINGO4Q6UY18 593 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TMPRSS11FQ6ZWK6 438 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 KRT74Q7RTS7 529 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 CAMKMTQ7Z624 323 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 ZNF554Q86TJ5 538 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 SLC34A3Q8N130 599 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TTC30BQ8N4P2 665 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 Q8N7P7 452 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 KCTD6Q8NC69 237 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 OR5AP2Q8NGF4 316 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TEKT4Q8WW24 435 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 SLAMF9Q96A28 289 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 ZNF830Q96NB3 372 aaPredicted RBP3.14□□□□□ -1.91
VPS50-219ENST00000495039 MYADMQ96S97 322 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 BTBD10Q9BSF8 475 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 DGCR6LQ9BY27 220 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 TBC1D17Q9HA65 648 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 OLAHQ9NV23 265 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 CLIC5Q9NZA1 410 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 IL17BQ9UHF5 180 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 MUTYHQ9UIF7 546 aa3.14□□□□□ -1.91
VPS50-219ENST00000495039 ZHX1Q9UKY1 873 aaPredicted RBP3.14□□□□□ -1.91
VPS50-219ENST00000495039 E9PI62 339 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 DNTTP04053 509 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 SLC6A6P31641 620 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 PAX8Q06710 450 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 IL11RAQ14626 422 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 FASTKD3Q14CZ7 662 aaKnown RBP3.13□□□□□ -1.91
VPS50-219ENST00000495039 TAF13Q15543 124 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 RNF212Q495C1 297 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 ERMARDQ5T6L9 678 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 SLC30A6Q6NXT4 461 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 FAM198BQ6UWH4 519 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 ZNF595Q8IYB9 648 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 TC2NQ8N9U0 490 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 SECISBP2LQ93073 1101 aaKnown RBP3.13□□□□□ -1.91
VPS50-219ENST00000495039 SFXN2Q96NB2 322 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 SEPHS2Q99611 448 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 TXLNGYQ9BZA5 131 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 VN1R1Q9GZP7 353 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 NOL11Q9H8H0 719 aaKnown RBP3.13□□□□□ -1.91
VPS50-219ENST00000495039 PIH1D3Q9NQM4 214 aaKnown RBP3.13□□□□□ -1.91
VPS50-219ENST00000495039 BCCIPQ9P287 314 aaKnown RBP eCLIP3.13□□□□□ -1.91
VPS50-219ENST00000495039 SLC24A2Q9UI40 661 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 OSGIN1Q9UJX0 560 aa3.13□□□□□ -1.91
VPS50-219ENST00000495039 TRBC2A0A5B9 178 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 GAPDHSO14556 408 aaPredicted RBP3.12□□□□□ -1.91
VPS50-219ENST00000495039 IDH3BO43837 385 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 PLOD3O60568 738 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 PSMD10O75832 226 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 TOMM70O94826 608 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 PIGNO95427 931 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 DANCRP0C864 163 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 MTHFRP42898 656 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 CX3CL1P78423 397 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 DMPKQ09013 629 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 RASA2Q15283 850 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 CRY2Q49AN0 593 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 SEL1L3Q68CR1 1132 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 PLPPR4Q7Z2D5 763 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 IQCHQ86VS3 1027 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 KRTAP11-1Q8IUC1 163 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 LACC1Q8IV20 430 aa3.12□□□□□ -1.91
VPS50-219ENST00000495039 CFAP206Q8IYR0 622 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms