RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CEACAM8P31997 349 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 RPL21P46778 160 aaKnown RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 LIMK1P53667 647 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 ROR1Q01973 937 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 GCNT1Q02742 428 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 PRKCZQ05513 592 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 NONOQ15233 471 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMC4-224ENST00000494612 ODF4Q2M2E3 257 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 UGT3A2Q3SY77 523 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 ZC2HC1CQ53FD0 456 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 LBHQ53QV2 105 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 CYP4A22Q5TCH4 519 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 SFMBT2Q5VUG0 894 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 MFSD6Q6ZSS7 791 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 C11orf57Q6ZUT1 292 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 KRT77Q7Z794 578 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 TRPT1Q86TN4 253 aaKnown RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 OR8H3Q8N146 312 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 KLHDC9Q8NEP7 349 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 PROX1Q92786 737 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 FAM71F1Q96KD3 344 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 SPAG5Q96R06 1193 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 INTS14Q96SY0 518 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 ADPGKQ9BRR6 497 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 EDEM3Q9BZQ6 932 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 LAT2Q9GZY6 243 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 MIS12Q9H081 205 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 FN3KQ9H479 309 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 SDR39U1Q9NRG7 319 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 ZNF701Q9NV72 531 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.05□□□□□ -1.76
SMC4-224ENST00000494612 ZDHHC2Q9UIJ5 367 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 HECW2Q9P2P5 1572 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 ADGRL1O94910 1474 aa4.05□□□□□ -1.76
SMC4-224ENST00000494612 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ANXA2P2A6NMY6 339 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ENO4A6NNW6 628 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 SMIM1B2RUZ4 78 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 SLC22A2O15244 555 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 PRKRAO75569 313 aaKnown RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 INHBAP08476 426 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 FRMD6-AS1P0C7T7 363 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 IGHV4-38-2P0DP08 117 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 SAGP10523 405 aaPredicted RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 IRF2P14316 349 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 DARSP14868 501 aaKnown RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 LIFP15018 202 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 LBPP18428 481 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ACAT1P24752 427 aaKnown RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 CDC25CP30307 473 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ALDH1B1P30837 517 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 MAP2K2P36507 400 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 NR2C2P49116 596 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 MRGPRG-AS1Q2M3A8 158 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 CTU2Q2VPK5 515 aaKnown RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 LACTB2Q53H82 288 aaPredicted RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 MPP7Q5T2T1 576 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 HECTD3Q5T447 861 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 PET117Q6UWS5 81 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 CEACAM20Q6UY09 585 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 MARK2Q7KZI7 788 aaKnown RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 GLRX5Q86SX6 157 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ISCA2Q86U28 154 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 FAM9BQ8IZU0 186 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 SIX6OS1Q8N1H7 587 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 BMPERQ8N8U9 685 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 OR4K1Q8NGD4 311 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 OR10V1Q8NGI7 309 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 ST6GALNAC6Q969X2 333 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ATP6V1E2Q96A05 226 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 RMDN2Q96LZ7 410 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 SPATA33Q96N06 139 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 CITED2Q99967 270 aaPredicted RBP4.04□□□□□ -1.76
SMC4-224ENST00000494612 SNX25Q9H3E2 840 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 TXNDC16Q9P2K2 825 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ACAD8Q9UKU7 415 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 TNNQ9UQP3 1299 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 KCNK7Q9Y2U2 307 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 FHAD1B1AJZ9 1412 aa4.04□□□□□ -1.76
SMC4-224ENST00000494612 ADCY10Q96PN6 1610 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 A0A1W2PPW3 197 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 RNASEH1O60930 286 aaKnown RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 RPS6KA5O75582 802 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 MOCS3O95396 460 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 CD48P09326 243 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 FAM58BPP0C7Q3 252 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 PLA2G4BP0C869 781 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 HOXC13P31276 330 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 LBX1P52954 281 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 MTCP1P56278 107 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 RRS1Q15050 365 aaKnown RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 LRRC73Q5JTD7 316 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 C6orf136Q5SQH8 315 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 ARHGEF16Q5VV41 709 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SLC35E4Q6ICL7 350 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 ENPP7Q6UWV6 458 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 MEX3BQ6ZN04 569 aaKnown RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 SH2D5Q6ZV89 423 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms