RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SLCO4C1Q6ZQN7 724 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 SLC44A3Q8N4M1 653 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 DNAJB14Q8TBM8 379 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 CLMPQ9H6B4 373 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 KCNK12Q9HB15 430 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 GPRC5BQ9NZH0 403 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 DNMT3AQ9Y6K1 912 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-225ENST00000494465 RNGTTO60942 597 aaKnown RBP16.01■□□□□ 0.15
ATG4B-225ENST00000494465 NPPAP01160 153 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 C8BP07358 591 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 HNF4AP41235 474 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 TAP2Q03519 686 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 ZNF33BQ06732 778 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 TAF11Q15544 211 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 ADNP2Q6IQ32 1131 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 DNAJC9Q8WXX5 260 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 FCRL1Q96LA6 429 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 SLC17A9Q9BYT1 436 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 DPY30Q9C005 99 aa16.01■□□□□ 0.15
ATG4B-225ENST00000494465 SPATA6Q9NWH7 488 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-225ENST00000494465 SHISA7A6NL88 538 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 CLGNO14967 610 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 AMD1P17707 334 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 DRD1P21728 446 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 TACR1P25103 407 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 CSTF3Q12996 717 aaKnown RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 CAPN13Q6MZZ7 669 aaPredicted RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 GLB1L3Q8NCI6 653 aaPredicted RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 PHC3Q8NDX5 983 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 OR5AR1Q8NGP9 310 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 CLHC1Q8NHS4 586 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 ITM2CQ9NQX7 267 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 KCNE2Q9Y6J6 123 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 PRSS51A0A1B0GVH4 220 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 TCRBV3S1A0A5B6 114 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 GPR89AB7ZAQ6 455 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 CASQ2O14958 399 aaPredicted RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 GPR89BP0CG08 455 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 ACPPP15309 386 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 SDC1P18827 310 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 IGFALSP35858 605 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 SGCGQ13326 291 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 MUM1Q2TAK8 710 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 MAP7D1Q3KQU3 841 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 FAM174BQ3ZCQ3 159 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 SPANXN4Q5MJ08 99 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 NANOGP8Q6NSW7 305 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 SPATA24Q86W54 205 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 PQLC1Q8N2U9 271 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 WDR34Q96EX3 536 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 TMEM74Q96NL1 305 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 MTERF1Q99551 399 aaKnown RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 C8orf33Q9H7E9 229 aaPredicted RBP16■□□□□ 0.15
ATG4B-225ENST00000494465 NANOGQ9H9S0 305 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 LIMD1Q9UGP4 676 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 ASF1AQ9Y294 204 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 TMED5Q9Y3A6 229 aa16■□□□□ 0.15
ATG4B-225ENST00000494465 KMOO15229 486 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 RPSAP08865 295 aaKnown RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 MYCLP1P12525 358 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CLDN8P56748 225 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 MRPS21P82921 87 aaKnown RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 RHDQ02161 417 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 GRSF1Q12849 480 aaKnown RBP eCLIP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 SPATS1Q496A3 300 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CMPK2Q5EBM0 449 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CATSPEREQ5SY80 951 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CHRDL2Q6WN34 429 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 HORMAD1Q86X24 394 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 SLC13A3Q8WWT9 602 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 TFGQ92734 400 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 C11orf24Q96F05 449 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 NAF1Q96HR8 494 aaKnown RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 UHRF1Q96T88 793 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 ZBTB18Q99592 522 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CD93Q9NPY3 652 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 PHPT1Q9NRX4 125 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 PRPS2P11908 318 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 ATP6V1B2P21281 511 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 IGFBP4P22692 258 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 PPP2CBP62714 309 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 PPP2CAP67775 309 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 LPCAT4Q643R3 524 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 CYP2R1Q6VVX0 501 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 TMPRSS11BQ86T26 416 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 HID1Q8IV36 788 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 LILRA2Q8N149 483 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 OR7G3Q8NG95 312 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 GTF2H4Q92759 462 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 DNASE1L2Q92874 299 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 APOLD1Q96LR9 279 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 IL17FQ96PD4 163 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 SGK2Q9HBY8 427 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 FZD3Q9NPG1 666 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
ATG4B-225ENST00000494465 RIMS3Q9UJD0 308 aa15.99■□□□□ 0.15
ATG4B-225ENST00000494465 ETHE1O95571 254 aa15.98■□□□□ 0.15
ATG4B-225ENST00000494465 PGRP06401 933 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms