RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 VAC14Q08AM6 782 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 MTAPQ13126 283 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 KCNAB2Q13303 367 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 GPM6BQ13491 265 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 AAK1Q2M2I8 961 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 MPPE1Q53F39 396 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SLC44A4Q53GD3 710 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 RTP2Q5QGT7 225 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 ANXA8L1Q5VT79 327 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 GTF2IRD2BQ6EKJ0 949 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 ANKRD26P1Q6NSI1 321 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 TUBA3EQ6PEY2 450 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SPESP1Q6UW49 350 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 FAM92BQ6ZTR7 304 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 TPRG1Q6ZUI0 275 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 PRSS48Q7RTY5 328 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 GTF2IRD2Q86UP8 949 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 TSPYL5Q86VY4 417 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 SLC30A8Q8IWU4 369 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 PARP8Q8N3A8 854 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 BEND7Q8N7W2 519 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 MCOLN3Q8TDD5 553 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SH3RF2Q8TEC5 729 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 GIPC3Q8TF64 312 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 ABTB1Q969K4 478 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 REPS1Q96D71 796 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 MRPL38Q96DV4 380 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 EXOC2Q96KP1 924 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 BRF2Q9HAW0 419 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 IL1RAPQ9NPH3 570 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.19□□□□□ -0.62
RFC4-214ENST00000494047 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 NFKBIL1Q9UBC1 381 aaPredicted RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 VPS51Q9UID3 782 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 PAIP2BQ9ULR5 123 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 RUVBL1Q9Y265 456 aaKnown RBP11.19□□□□□ -0.62
RFC4-214ENST00000494047 ERGIC3Q9Y282 383 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 A3GALT2U3KPV4 340 aa11.19□□□□□ -0.62
RFC4-214ENST00000494047 TRANK1O15050 2925 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 A0A1B0GTW7 788 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 A0A1W2PPW3 197 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 SAGE2PA6NJ88 616 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 RFXAPO00287 272 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 GFRA2O00451 464 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 RFXANKO14593 260 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 TAPBPO15533 448 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 HS6ST1O60243 411 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 DFNA5O60443 496 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 TBL1XO60907 577 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 NDUFS2O75306 463 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 PRKD3O94806 890 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ABLIM3O94929 683 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 VNN2O95498 520 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 OLFM2O95897 454 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 FTH1P02794 183 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 FABP3P05413 133 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ABCB1P08183 1280 aaPredicted RBP11.18□□□□□ -0.62
RFC4-214ENST00000494047 BCKDHAP12694 445 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 HMGA1P17096 107 aaKnown RBP11.18□□□□□ -0.62
RFC4-214ENST00000494047 POLR2EP19388 210 aaKnown RBP11.18□□□□□ -0.62
RFC4-214ENST00000494047 UGT1A1P22309 533 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 UGT1A4P22310 534 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 CTNNB1P35222 781 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 UGT1A3P35503 534 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 UGT1A5P35504 534 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 HNF4AP41235 474 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 RPIAP49247 311 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 DCDC1P59894 354 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ISL1P61371 349 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFC4-214ENST00000494047 GBX1Q14549 363 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 PON2Q15165 354 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 DUOXA1Q1HG43 343 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 PROX2Q3B8N5 592 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 PLEKHG6Q3KR16 790 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 SPANXN4Q5MJ08 99 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 CPZQ66K79 652 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 XAF1Q6GPH4 301 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 OR2T5Q6IEZ7 315 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 CRTC3Q6UUV7 619 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 HORMAD1Q86X24 394 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 KLHDC8AQ8IYD2 350 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 OR7A2PQ8NGA2 310 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 OR8J2Q8NGG1 315 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 OR2T29Q8NH02 315 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ASIC4Q96FT7 647 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 HHIPQ96QV1 700 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 CPEB1Q9BZB8 566 aaKnown RBP11.18□□□□□ -0.62
RFC4-214ENST00000494047 ABCB8Q9NUT2 735 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 DNAJC11Q9NVH1 559 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 ARL15Q9NXU5 204 aa11.18□□□□□ -0.62
RFC4-214ENST00000494047 SLAMF8Q9P0V8 285 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms