RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 HMX2A2RU54 273 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 TMEM150CB9EJG8 249 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 CDC7O00311 574 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 KDM1AO60341 852 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 SPAG6O75602 509 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 KRT37O76014 449 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 KIAA0754O94854 1291 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 LIPCP11150 499 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 OAS2P29728 719 aaKnown RBP11.22□□□□□ -0.61
UBA3-211ENST00000493957 PNLIPRP1P54315 467 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 IL2P60568 153 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 BMPR2Q13873 1038 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 ZXDCQ2QGD7 858 aaPredicted RBP11.22□□□□□ -0.61
UBA3-211ENST00000493957 COL28A1Q2UY09 1125 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 CMC1Q7Z7K0 106 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 IFT20Q8IY31 132 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 LRRC56Q8IYG6 542 aaPredicted RBP11.22□□□□□ -0.61
UBA3-211ENST00000493957 CARFQ8N187 725 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 GALNT6Q8NCL4 622 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 FBXO15Q8NCQ5 510 aaPredicted RBP11.22□□□□□ -0.61
UBA3-211ENST00000493957 OR2A1Q8NGT9 310 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 HMGCLL1Q8TB92 370 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 NKD1Q969G9 470 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 RAB11FIP5Q9BXF6 653 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 ASPSCR1Q9BZE9 553 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 ULBP3Q9BZM4 244 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 B3GNT4Q9C0J1 378 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 SYNPO2LQ9H987 977 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 CPNE5Q9HCH3 593 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 PDE7BQ9NP56 450 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 STOX2Q9P2F5 926 aaPredicted RBP11.22□□□□□ -0.61
UBA3-211ENST00000493957 TXNDC16Q9P2K2 825 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 PILRAQ9UKJ1 303 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 RARRES3Q9UL19 164 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 SH2B3Q9UQQ2 575 aa11.22□□□□□ -0.61
UBA3-211ENST00000493957 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 E7ENX8 843 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 STMND1H3BQB6 276 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 RRP8O43159 456 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 EFSO43281 561 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 ZBTB14O43829 449 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 RAD1O60671 282 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 NTRK1P04629 796 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 C8GP07360 202 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 MAP4P27816 1152 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 GRIA3P42263 894 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 TUBB4BP68371 445 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 ACY1Q03154 408 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 TAP2Q03519 686 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 IL11RAQ14626 422 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 USP10Q14694 798 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 SLMAPQ14BN4 828 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 SF1Q15637 639 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 UAP1Q16222 522 aaPredicted RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 TMTC4Q5T4D3 741 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 GRTP1Q5TC63 336 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 FIGLAQ6QHK4 219 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 SBSNQ6UWP8 590 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 LRRC69Q6ZNQ3 347 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 PPP1R3BQ86XI6 285 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 SYTL1Q8IYJ3 562 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 SLC38A9Q8NBW4 561 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 OR2L3Q8NG85 312 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 SMPDL3AQ92484 453 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 FCRL4Q96PJ5 515 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 TEFMQ96QE5 360 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 SLC12A9Q9BXP2 914 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 FUT8Q9BYC5 575 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 TXLNGYQ9BZA5 131 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 ATG10Q9H0Y0 220 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 ACSS3Q9H6R3 686 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 AKIRIN1Q9H9L7 192 aaPredicted RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 PARVBQ9HBI1 364 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 GPAMQ9HCL2 828 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 UTP6Q9NYH9 597 aaKnown RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 TAC3Q9UHF0 121 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 LNPEPQ9UIQ6 1025 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 TMEM184BQ9Y519 407 aaPredicted RBP11.21□□□□□ -0.61
UBA3-211ENST00000493957 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
UBA3-211ENST00000493957 LOC400499M0QZD8 3231 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 MED13Q9UHV7 2174 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 IGKV1-8A0A0C4DH67 115 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 LOC101059948A0A1B0GTJ6 334 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 H3BMH7 237 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 CTSVO60911 334 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 GUCA1CO95843 209 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 CYP2A7P20853 494 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 CD82P27701 267 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 RPA3P35244 121 aaPredicted RBP11.2□□□□□ -0.62
UBA3-211ENST00000493957 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
UBA3-211ENST00000493957 TBPL1P62380 186 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 POU4F1Q01851 419 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 DLG1Q12959 904 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 SP140Q13342 867 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 NAB1Q13506 487 aa11.2□□□□□ -0.62
UBA3-211ENST00000493957 ARHGAP19Q14CB8 494 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms