RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	KLHL11	Q9NVR0	708 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	C2orf42	Q9NWW7	574 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	CACNA2D2	Q9NY47	1150 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	NPAP1	Q9NZP6	1156 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	IGLV3-10	A0A075B6K4	115 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	RCCD1	A6NED2	376 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	EEF2K	O00418	725 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	BUB1	O43683	1085 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	EIF1B	O60739	113 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	PTBP1	P26599	531 aa	Known RBP eCLIP	11.31	□□□□□ -0.6	1e-7	■■■■■ 45.2
BRCA1-222	ENST00000493919	MAPK3	P27361	379 aa	Predicted RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	OR1E1	P30953	314 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	EIF1	P41567	113 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	KIR2DL1	P43626	348 aa	Predicted RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ALDH3B2	P48448	385 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	DGKQ	P52824	942 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ITGA8	P53708	1063 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	SLC25A11	Q02978	314 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	DBP	Q10586	325 aa	Predicted RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	FADD	Q13158	208 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	FLOT2	Q14254	428 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	EIF4H	Q15056	248 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	MANEAL	Q5VSG8	457 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	TMEM215	Q68D42	235 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	MBLAC2	Q68D91	279 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	TXNRD3NB	Q6F5E7	133 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ITPRIPL1	Q6GPH6	555 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	TSSK4	Q6SA08	328 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	C1orf210	Q8IVY1	113 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	CYP4Z2P	Q8N1L4	340 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	PRR18	Q8N4B5	295 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	SPEM1	Q8N4L4	309 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	IL17RC	Q8NAC3	791 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	TPCN2	Q8NHX9	752 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	QRFPR	Q96P65	431 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	KCTD15	Q96SI1	283 aa	Predicted RBP	11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ACOX2	Q99424	681 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ZNF416	Q9BWM5	594 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	KLHL1	Q9NR64	748 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	C19orf12	Q9NSK7	152 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	ELOVL2	Q9NXB9	296 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	RNF14	Q9UBS8	474 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	VPS28	Q9UK41	221 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	HYOU1	Q9Y4L1	999 aa		11.31	□□□□□ -0.6
BRCA1-222	ENST00000493919	DOCK4	Q8N1I0	1966 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	DRGX	A6NNA5	263 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919		H3BSA7	217 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	DAPK3	O43293	454 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	FKBP6	O75344	327 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	PTBP3	O95758	552 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	S100P	P25815	95 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	MAT2A	P31153	395 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	MRPS21	P82921	87 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	BNC1	Q01954	994 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	NRG1	Q02297	640 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	TRIP13	Q15645	432 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	SSX2	Q16385	188 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	FNDC3B	Q53EP0	1204 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	ACSBG2	Q5FVE4	666 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	RNF219	Q5W0B1	726 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	ATG16L1	Q676U5	607 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	SERPINA13P	Q6UXR4	307 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	LINC00299	Q6ZSB3	139 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	ZNF767P	Q75MW2	155 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	TRMT11	Q7Z4G4	463 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	PRSS42	Q7Z5A4	293 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	DSG4	Q86SJ6	1040 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	ADIPOR2	Q86V24	386 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	HIPK1	Q86Z02	1210 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	APCDD1	Q8J025	514 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	KDF1	Q8NAX2	398 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	FIG4	Q92562	907 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	CITED4	Q96RK1	184 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	ZNF251	Q9BRH9	671 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	EXD2	Q9NVH0	621 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	GLS2	Q9UI32	602 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	INTS6	Q9UL03	887 aa	Known RBP	11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919	NEU3	Q9UQ49	428 aa		11.3	□□□□□ -0.6
BRCA1-222	ENST00000493919		A0A0A0MRY4	1105 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	RRP8	O43159	456 aa	Known RBP	11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	ULK1	O75385	1050 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	ZWINT	O95229	277 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	NTRK1	P04629	796 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	THRA	P10827	490 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	HOXB2	P14652	356 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	GOT1	P17174	413 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	UGT2B10	P36537	528 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	CXCL12	P48061	93 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	ARCN1	P48444	511 aa	Known RBP	11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	CAPZA1	P52907	286 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	TAS2R40	P59535	323 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	MPP1	Q00013	466 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	GLO1	Q04760	184 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	GALE	Q14376	348 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	ZNF234	Q14588	700 aa		11.29	□□□□□ -0.6
BRCA1-222	ENST00000493919	ANGPT1	Q15389	498 aa		11.29	□□□□□ -0.6

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