RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CHST8Q9H2A9 424 aa21.75■■□□□ 1.07
SNIP1-203ENST00000493916 ENAMQ9NRM1 1142 aa21.75■■□□□ 1.07
SNIP1-203ENST00000493916 EURLQ9NYK6 297 aa21.75■■□□□ 1.07
SNIP1-203ENST00000493916 MOCS1Q9NZB8 636 aa21.75■■□□□ 1.07
SNIP1-203ENST00000493916 SRPK3Q9UPE1 567 aa21.75■■□□□ 1.07
SNIP1-203ENST00000493916 EIF3HO15372 352 aaKnown RBP eCLIP21.74■■□□□ 1.07
SNIP1-203ENST00000493916 FAM87AP0C7U9 286 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 GRIA3P42263 894 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 RGS4P49798 205 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 PNLIPRP1P54315 467 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 MGAT5Q09328 741 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 ZC3H12BQ5HYM0 836 aaKnown RBP21.74■■□□□ 1.07
SNIP1-203ENST00000493916 ATP1A1-AS1Q5TC04 95 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 RHBDD2Q6NTF9 364 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 C16orf46Q6P387 395 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 FAM198BQ6UWH4 519 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 SYVN1Q86TM6 617 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 MCATQ8IVS2 390 aaKnown RBP21.74■■□□□ 1.07
SNIP1-203ENST00000493916 MIPEPQ99797 713 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 RAB17Q9H0T7 212 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 ZFATQ9P243 1243 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 CDC23Q9UJX2 597 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 UTP11Q9Y3A2 253 aaKnown RBP21.74■■□□□ 1.07
SNIP1-203ENST00000493916 ATRXP46100 2492 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 BOD1L1Q8NFC6 3051 aa21.74■■□□□ 1.07
SNIP1-203ENST00000493916 SNRNP200O75643 2136 aaKnown RBP21.74■■□□□ 1.07
SNIP1-203ENST00000493916 ZBTB14O43829 449 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 SLC16A8O95907 504 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 CTSBP07858 339 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 SFTPCP11686 197 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 CCR10P46092 362 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 LCN10Q6JVE6 187 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 PAQR3Q6TCH7 311 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 UBE2R2Q712K3 238 aaPredicted RBP21.73■■□□□ 1.07
SNIP1-203ENST00000493916 SLC26A11Q86WA9 606 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 ZNF843Q8N446 348 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 PROKR1Q8TCW9 393 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 ZNF480Q8WV37 535 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 EEF1AKMT1Q8WVE0 214 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 ZNF285Q96NJ3 590 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 NLNQ9BYT8 704 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 PHACTR1Q9C0D0 580 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 ADNPQ9H2P0 1102 aa21.73■■□□□ 1.07
SNIP1-203ENST00000493916 FARSAQ9Y285 508 aaKnown RBP21.73■■□□□ 1.07
SNIP1-203ENST00000493916 C8GP07360 202 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 CAPN1P07384 714 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 FDXRP22570 491 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 CMPK1P30085 196 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 RPA3P35244 121 aaPredicted RBP21.72■■□□□ 1.07
SNIP1-203ENST00000493916 GCGRP47871 477 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 POLE2P56282 527 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 CAV1Q03135 178 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 C19orf57Q0VDD7 668 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 SP140Q13342 867 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 ERV3-1Q14264 604 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 DEFB109BQ30KR1 87 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 PTCHD3Q3KNS1 767 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 HECTD2Q5U5R9 776 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 FAM45BPQ6NSW5 357 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 ZNF655Q8N720 491 aaPredicted RBP21.72■■□□□ 1.07
SNIP1-203ENST00000493916 GPATCH11Q8N954 259 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 FAM45AQ8TCE6 357 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 GEMIN8Q9NWZ8 242 aaKnown RBP21.72■■□□□ 1.07
SNIP1-203ENST00000493916 ANKMY1Q9P2S6 941 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 TUBD1Q9UJT1 453 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 VWA7Q9Y334 891 aa21.72■■□□□ 1.07
SNIP1-203ENST00000493916 E7ENX8 843 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 SLC16A5O15375 505 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 SYF2O95926 243 aaKnown RBP21.71■■□□□ 1.07
SNIP1-203ENST00000493916 FURINP09958 794 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 AGXTP21549 392 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 RPS18P62269 152 aaKnown RBP21.71■■□□□ 1.07
SNIP1-203ENST00000493916 TAP2Q03519 686 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 UGT8Q16880 541 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 TCTE1Q5JU00 501 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 SUSD1Q6UWL2 747 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 RNF44Q7L0R7 432 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 MYO1HQ8N1T3 1032 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 ENDOVQ8N8Q3 282 aaKnown RBP21.71■■□□□ 1.07
SNIP1-203ENST00000493916 PYROXD1Q8WU10 500 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 APOBEC4Q8WW27 367 aaKnown RBP21.71■■□□□ 1.07
SNIP1-203ENST00000493916 DLG3Q92796 817 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 GBP5Q96PP8 586 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 C17orf62Q9BQA9 187 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 SAYSD1Q9NPB0 183 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 IRAK4Q9NWZ3 460 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 NSMCE4AQ9NXX6 385 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 POLHQ9Y253 713 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 PSAT1Q9Y617 370 aa21.71■■□□□ 1.07
SNIP1-203ENST00000493916 CDC14CA4D256 554 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 OR2A25A4D2G3 310 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 C9J4A7 227 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 CTSVO60911 334 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 CCNDBP1O95273 360 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 TSPAN12O95859 305 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 ILF2Q12905 390 aaKnown RBP21.7■■□□□ 1.06
SNIP1-203ENST00000493916 PDAP1Q13442 181 aaKnown RBP21.7■■□□□ 1.06
SNIP1-203ENST00000493916 NCF4Q15080 339 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 WHAMMP3Q1A5X7 153 aa21.7■■□□□ 1.06
SNIP1-203ENST00000493916 LRRC56Q8IYG6 542 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms