RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
SAMM50-204ENST00000493161 HYKKA2RU49 373 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 AKR1B15C9JRZ8 316 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 KDM1AO60341 852 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 GPC4O75487 556 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 S1PR4O95977 384 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 GOT2P00505 430 aaKnown RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ZGLP1P0C6A0 271 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 PRR35P0CG20 571 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ACPPP15309 386 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 MST1P26927 711 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 SOX11P35716 441 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 TNFSF10P50591 281 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ART3Q13508 389 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 YOD1Q5VVQ6 348 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF534Q76KX8 674 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 LDB1Q86U70 411 aaPredicted RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 NR4A3Q92570 626 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 MIEF2Q96C03 454 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 CCDC120Q96HB5 630 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF778Q96MU6 729 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 PPP1R2P1Q96PQ5 205 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 ZC3H7BQ9UGR2 993 aaKnown RBP13.07□□□□□ -0.32
SAMM50-204ENST00000493161 DUSP10Q9Y6W6 482 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 CNTRLQ7Z7A1 2325 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 CELSR1Q9NYQ6 3014 aa13.07□□□□□ -0.32
SAMM50-204ENST00000493161 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 MAP2K7O14733 419 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 RASGRF2O14827 1237 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 UNC5CO95185 931 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 COX6A1P12074 109 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 GRIA1P42261 906 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 RIPPLY3P57055 190 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 EEF1A2Q05639 463 aaKnown RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 ZXDCQ2QGD7 858 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 FAM214AQ32MH5 1076 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 GFRALQ6UXV0 394 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 MRGPRGQ86SM5 289 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 CNGA4Q8IV77 575 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 DCUN1D3Q8IWE4 304 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 KBTBD2Q8IY47 623 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 SLC22A18Q96BI1 424 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 LRRC45Q96CN5 670 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 LURAP1Q96LR2 239 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 MIPEPQ99797 713 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 INTS7Q9NVH2 962 aaKnown RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF282Q9UDV7 671 aaPredicted RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 SH3BGRL2Q9UJC5 107 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 RUVBL2Q9Y230 463 aaKnown RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 R3HDM2Q9Y2K5 976 aaKnown RBP13.06□□□□□ -0.32
SAMM50-204ENST00000493161 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 DCHS2Q6V1P9 2916 aa13.06□□□□□ -0.32
SAMM50-204ENST00000493161 NSG1A0A0A6YYJ2 146 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 CCL21O00585 134 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 TJP3O95049 919 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 EIF2S1P05198 315 aaKnown RBP13.05□□□□□ -0.32
SAMM50-204ENST00000493161 AOAHP28039 575 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 HTR1EP28566 365 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 BDKRB1P46663 353 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
SAMM50-204ENST00000493161 RWDD2BP57060 319 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 OCA2Q04671 838 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 FAAH2Q6GMR7 532 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 TC2NQ8N9U0 490 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 HAS2Q92819 552 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 ZUFSPQ96AP4 578 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 C10orf90Q96M02 699 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 TMEM121Q9BTD3 319 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 IL1RAPL1Q9NZN1 696 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
SAMM50-204ENST00000493161 KLF2Q9Y5W3 355 aaPredicted RBP13.05□□□□□ -0.32
SAMM50-204ENST00000493161 MYO7BQ6PIF6 2116 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 IGLV3-12A0A075B6K2 115 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 A0A1W2PPV9 198 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 DYTNA2CJ06 578 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 SRPX2O60687 465 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 ABCB7O75027 752 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 KRT38O76015 456 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 USP1O94782 785 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 SLCO2B1O94956 709 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 WDPCPO95876 746 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 EFNA3P52797 238 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 ZNF630Q2M218 657 aaPredicted RBP13.04□□□□□ -0.32
SAMM50-204ENST00000493161 TSTD2Q5T7W7 516 aa13.04□□□□□ -0.32
SAMM50-204ENST00000493161 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms