RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SLC7A2P52569 658 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC34A1Q06495 639 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TDGQ13569 410 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TSTA3Q13630 321 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 FLOT2Q14254 428 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 MLF2Q15773 248 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 CCDC85BQ15834 202 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 HABP4Q5JVS0 413 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PRAMEF14Q5SWL7 426 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PRAMEF13Q5VWM6 474 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 METRNLQ641Q3 311 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TMEM92Q6UXU6 159 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 CHST15Q7LFX5 561 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TRIM69Q86WT6 500 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 LIX1Q8N485 282 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 MINDY1Q8N5J2 469 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 GLB1L3Q8NCI6 653 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 OR5AR1Q8NGP9 310 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 OR2T34Q8NGX1 318 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 WDR20Q8TBZ3 569 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PROKR1Q8TCW9 393 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC26A7Q8TE54 656 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TFGQ92734 400 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 REPS1Q96D71 796 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 MTFMTQ96DP5 389 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TEX37Q96LM6 180 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 GPATCH1Q9BRR8 931 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 DPY30Q9C005 99 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TRIT1Q9H3H1 467 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 ACTL8Q9H568 366 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SGK2Q9HBY8 427 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 S100A14Q9HCY8 104 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC52A3Q9NQ40 469 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TM7SF3Q9NS93 570 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TMEM181Q9P2C4 612 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 NDRG2Q9UN36 371 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PSMD13Q9UNM6 376 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 TMED5Q9Y3A6 229 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PCDHGA11Q9Y5H2 935 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 C15orf38-AP3S2A0A0A6YYH1 394 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ASPDHA6ND91 283 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SHISA7A6NL88 538 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 FXYD1O00168 92 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 FPGTO14772 594 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ANKRD28O15084 1053 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 MAP3K7O43318 606 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 PI15O43692 258 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 STAMBPO95630 424 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 CEACAM5P06731 702 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 HOXC4P09017 264 aaPredicted RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ERGP11308 486 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 PCNAP12004 261 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 BCKDHAP12694 445 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ANPEPP15144 967 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 GABRG2P18507 467 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 HNRNPA2B1P22626 353 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 HSD17B2P37059 387 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ERFP50548 548 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 CLCNKAP51800 687 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 NEK2P51955 445 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 CLNS1AP54105 237 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SESN3P58005 492 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 TAP2Q03519 686 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 LAPTM5Q13571 262 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 DDX39BQ13838 428 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 E2F2Q14209 437 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 NFATC4Q14934 902 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ARHGAP19Q14CB8 494 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 TLR1Q15399 786 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SMAD2Q15796 467 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 USP39Q53GS9 565 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 PAGE2BQ5JRK9 111 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 C10orf62Q5T681 223 aaPredicted RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 THEMIS2Q5TEJ8 643 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ATG9BQ674R7 924 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 CAPRIN2Q6IMN6 1127 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 MED27Q6P2C8 311 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SUSD1Q6UWL2 747 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 LCTLQ6UWM7 567 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SLCO4C1Q6ZQN7 724 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 PRR23BQ6ZRT6 265 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ARPINQ7Z6K5 226 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 DHDDSQ86SQ9 333 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 LRRC56Q8IYG6 542 aaPredicted RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 TBC1D21Q8IYX1 336 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 RAB42Q8N4Z0 105 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 RNF148Q8N7C7 305 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 HIPK4Q8NE63 616 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SPDYE1Q8NFV5 336 aaPredicted RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 OR5K2Q8NHB8 316 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SETD7Q8WTS6 366 aaKnown RBP8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC5A11Q8WWX8 675 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 NEIL2Q969S2 332 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 VPS33AQ96AX1 596 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 LRRC58Q96CX6 371 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 ASB9Q96DX5 294 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 WDR34Q96EX3 536 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
SMARCC1-208ENST00000492896 FCRL1Q96LA6 429 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms