RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PRICKLE3O43900 615 aaPredicted RBP16.75■□□□□ 0.27
SEC13-218ENST00000490283 SYF2O95926 243 aaKnown RBP16.75■□□□□ 0.27
SEC13-218ENST00000490283 CAPN1P07384 714 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 PSMB5P28074 263 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 FOLR3P41439 243 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 GRIA3P42263 894 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 PTGIRP43119 386 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 RGS4P49798 205 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 RRADP55042 308 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 MPP1Q00013 466 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 CUL1Q13616 776 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 NKAIN1Q4KMZ8 207 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 ZNF385CQ66K41 422 aaPredicted RBP16.75■□□□□ 0.27
SEC13-218ENST00000490283 FCRL6Q6DN72 434 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 TTLL10Q6ZVT0 673 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 CREG2Q8IUH2 290 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 IP6K3Q96PC2 410 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 GPR21Q99679 349 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 AARSD1Q9BTE6 412 aaKnown RBP16.75■□□□□ 0.27
SEC13-218ENST00000490283 ING2Q9H160 280 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 PPANQ9NQ55 473 aaKnown RBP16.75■□□□□ 0.27
SEC13-218ENST00000490283 PYCARDQ9ULZ3 195 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 DHRS7Q9Y394 339 aa16.75■□□□□ 0.27
SEC13-218ENST00000490283 KRT87PA6NCN2 255 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 EIF3FO00303 357 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 SRPX2O60687 465 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 HAUS5O94927 633 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 F7P08709 466 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 ERVK-10P10266 1014 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 OTX2P32243 289 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 CCL11P51671 97 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 PNLIPRP1P54315 467 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 KLRB1Q12918 225 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 SLC9A5Q14940 896 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 FAM214AQ32MH5 1076 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 ZNF549Q6P9A3 640 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 KIAA0408Q6ZU52 694 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 ASB18Q6ZVZ8 466 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 MED25Q71SY5 747 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 PALM2Q8IXS6 379 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 TMEM102Q8N9M5 508 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 TEX19Q8NA77 164 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 FBXO15Q8NCQ5 510 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 C2CD4AQ8NCU7 369 aaPredicted RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 OR2A1Q8NGT9 310 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 GIMAP7Q8NHV1 300 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 LRRC39Q96DD0 335 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 SNF8Q96H20 258 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 SLC30A3Q99726 388 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 SLC25A23Q9BV35 468 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 ACAT2Q9BWD1 397 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 TRIM4Q9C037 500 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 MRPS30Q9NP92 439 aaKnown RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 CUTCQ9NTM9 273 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 TAS2R13Q9NYV9 303 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 ANKMY1Q9P2S6 941 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 PTRH2Q9Y3E5 179 aaKnown RBP16.74■□□□□ 0.27
SEC13-218ENST00000490283 KLK4Q9Y5K2 254 aa16.74■□□□□ 0.27
SEC13-218ENST00000490283 TLN1Q9Y490 2541 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 PABPN1LA6NDY0 278 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 PEX12O00623 359 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 BANF1O75531 89 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 DNAJB5O75953 348 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 IGHEP01854 428 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CTSBP07858 339 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 ERGP11308 486 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CASRP41180 1078 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 SKIV2L2P42285 1042 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 PGDP52209 483 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 ARL4CP56559 192 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 VSX2P58304 361 aaPredicted RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 CHAF1BQ13112 559 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 SSPNQ14714 243 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 HIF1AQ16665 826 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CPZQ66K79 652 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CPNE9Q8IYJ1 553 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CD200R1Q8TD46 325 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 ADAMTS17Q8TE56 1095 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 ASB11Q8WXH4 323 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CERS2Q96G23 380 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 CFAP36Q96G28 342 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 PKP4Q99569 1192 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 DPH7Q9BTV6 452 aa16.73■□□□□ 0.27
SEC13-218ENST00000490283 ZC3H7BQ9UGR2 993 aaKnown RBP16.73■□□□□ 0.27
SEC13-218ENST00000490283 A0A0J9YVX5 310 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 A0A1W2PPV9 198 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 DSCR3O14972 297 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TTI1O43156 1089 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 WISP1O95388 367 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 MCM3P25205 808 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 KCNC4Q03721 635 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 TLE1Q04724 770 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 MSS51Q4VC12 460 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 THEMIS2Q5TEJ8 643 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 FAM69BQ5VUD6 431 aa16.72■□□□□ 0.27
SEC13-218ENST00000490283 HIBCHQ6NVY1 386 aaPredicted RBP16.72■□□□□ 0.27
SEC13-218ENST00000490283 SUSD1Q6UWL2 747 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms