RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 AQP9O43315 295 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 UGDHO60701 494 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 GNAZP19086 355 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 EPHA3P29320 983 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 UBE2IP63279 158 aaKnown RBP20.19■□□□□ 0.82
SND1-214ENST00000489417 KIF19Q2TAC6 998 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 XKR6Q5GH73 641 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 TCHHL1Q5QJ38 904 aaPredicted RBP20.19■□□□□ 0.82
SND1-214ENST00000489417 LIPJQ5W064 366 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 DDIASQ8IXT1 998 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 NAGSQ8N159 534 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 LINC01555Q8NAE3 123 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 ZBTB44Q8NCP5 570 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 ZFPM2Q8WW38 1151 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 PATE1Q8WXA2 126 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 PIGKQ92643 395 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SH3KBP1Q96B97 665 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 HAUS8Q9BT25 410 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 PCBD2Q9H0N5 130 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 PFDN4Q9NQP4 134 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 POT1Q9NUX5 634 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 DOLKQ9UPQ8 538 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 KCNE1BA0A087WTH5 132 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 CCT8L1PA6NM43 557 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 B4DGG1 531 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 VIPP01282 170 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SHMT2P34897 504 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 BNC1Q01954 994 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 IFT88Q13099 833 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 PEAR1Q5VY43 1037 aaPredicted RBP20.19■□□□□ 0.82
SND1-214ENST00000489417 TRPM8Q7Z2W7 1104 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 MTDHQ86UE4 582 aaKnown RBP20.19■□□□□ 0.82
SND1-214ENST00000489417 SYT12Q8IV01 421 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SDR16C5Q8N3Y7 309 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SFRP1Q8N474 314 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 ACTRT2Q8TDY3 377 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SLC37A2Q8TED4 501 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 LCN9Q8WX39 176 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 NEIL2Q969S2 332 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SLC40A1Q9NP59 571 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 CPNE7Q9UBL6 633 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SH2B3Q9UQQ2 575 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 SNX11Q9Y5W9 270 aa20.19■□□□□ 0.82
SND1-214ENST00000489417 A0A1W2PPV9 198 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 ERICH4A6NGS2 130 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 MANBAO00462 879 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 FFAR3O14843 346 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 GPR42O15529 346 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 PIAS2O75928 621 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 WFS1O76024 890 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 LINC00032P0C843 101 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 JUPP14923 745 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 CASP2P42575 452 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 HTR6P50406 440 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 DOC2AQ14183 400 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 SIM2Q14190 667 aaPredicted RBP20.18■□□□□ 0.82
SND1-214ENST00000489417 CPSF6Q16630 551 aaKnown RBP eCLIP20.18■□□□□ 0.82
SND1-214ENST00000489417 LSM12Q3MHD2 195 aaKnown RBP20.18■□□□□ 0.82
SND1-214ENST00000489417 NXNQ6DKJ4 435 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 SLCO4C1Q6ZQN7 724 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 ZNF771Q7L3S4 317 aaPredicted RBP20.18■□□□□ 0.82
SND1-214ENST00000489417 TMPRSS11BQ86T26 416 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 SLC9B2Q86UD5 537 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 SLC5A11Q8WWX8 675 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 JPH3Q8WXH2 748 aaPredicted RBP20.18■□□□□ 0.82
SND1-214ENST00000489417 CCT6BQ92526 530 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 C3orf30Q96M34 536 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 LRRC37BQ96QE4 947 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 CCT7Q99832 543 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 TAC3Q9UHF0 121 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 PTGDR2Q9Y5Y4 395 aa20.18■□□□□ 0.82
SND1-214ENST00000489417 LMO7DNF2Z398 122 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 FCHO1O14526 889 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 YY2O15391 372 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 CCDC22O60826 627 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 SDC3O75056 442 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 KRT6AP02538 564 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 KRT6BP04259 564 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 ANXA6P08133 673 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 HNF4AP41235 474 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 KRT6CP48668 564 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 E2F2Q14209 437 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 TBCCQ15814 346 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 GRHL2Q6ISB3 625 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 IL27RAQ6UWB1 636 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 SCIMPQ6UWF3 145 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 RNF165Q6ZSG1 346 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 AMIGO1Q86WK6 493 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 SFTPA2Q8IWL1 248 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 CEP70Q8NHQ1 597 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 WDR34Q96EX3 536 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 PTCD3Q96EY7 689 aaKnown RBP20.17■□□□□ 0.82
SND1-214ENST00000489417 PRR11Q96HE9 360 aaPredicted RBP20.17■□□□□ 0.82
SND1-214ENST00000489417 ZFP69BQ9UJL9 534 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 SNX6Q9UNH7 406 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 PCDHGA2Q9Y5H1 932 aa20.17■□□□□ 0.82
SND1-214ENST00000489417 FAM86C2PA6NEL3 165 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 E9PBE3 544 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 KLHL41O60662 606 aa20.16■□□□□ 0.82
SND1-214ENST00000489417 VPS4BO75351 444 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms