RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SEMA4FO95754 770 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 RPN2P04844 631 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 CEACAM5P06731 702 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 KRT16P08779 473 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 IMPA1P29218 277 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 CPA2P48052 419 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 STX1BP61266 288 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 MAPRE2Q15555 327 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 GSTA3Q16772 222 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 POU5F2Q8N7G0 328 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 DCBLD1Q8N8Z6 715 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 L3MBTL4Q8NA19 623 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 OR9A1PQ8NGU1 263 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 OR56A3Q8NH54 315 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 MARK4Q96L34 752 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 MIPEPQ99797 713 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 FZD3Q9NPG1 666 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 SLC22A14Q9Y267 594 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 IFRD1O00458 451 aaPredicted RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 TOR1BO14657 336 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 SLC16A8O95907 504 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 ALDOCP09972 364 aaKnown RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 SDHBP21912 280 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 KELP23276 732 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 AKT2P31751 481 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 MRPL19P49406 292 aaKnown RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 ACADVLP49748 655 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 CCR5P51681 352 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 CYLC2Q14093 348 aaPredicted RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 PTK2BQ14289 1009 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 ZRSR2Q15696 482 aaKnown RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 CCSMST1Q4G0I0 132 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 PEAR1Q5VY43 1037 aaPredicted RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 FAM219BQ5XKK7 198 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 IL27RAQ6UWB1 636 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 SLC36A4Q6YBV0 504 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 THOC6Q86W42 341 aaKnown RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 GALNT13Q8IUC8 556 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 DCUN1D3Q8IWE4 304 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 ARHGAP24Q8N264 748 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 PYCR2Q96C36 320 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 ATG10Q9H0Y0 220 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 MMADHCQ9H3L0 296 aaPredicted RBP12.33□□□□□ -0.44
NELFE-209ENST00000488426 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 ACACBO00763 2458 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 CABIN1Q9Y6J0 2220 aa12.33□□□□□ -0.44
NELFE-209ENST00000488426 KRT87PA6NCN2 255 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 PSMD12O00232 456 aaPredicted RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 SLC28A1O00337 649 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 GSC2O15499 205 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 NDUFS2O75306 463 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 KRT6AP02538 564 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 KRT6BP04259 564 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 CFIP05156 583 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 SLC35G4P0C7Q5 338 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 IDO1P14902 403 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 ENGP17813 658 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 OXTRP30559 389 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 KRT6CP48668 564 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 HTR6P50406 440 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 ERVK-8P63133 956 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 MXRA7P84157 204 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 FOXK2Q01167 660 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 ZNF33BQ06732 778 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 GRIK2Q13002 908 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 NAE1Q13564 534 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 FASTKQ14296 549 aaKnown RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 GRB7Q14451 532 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 NFATC4Q14934 902 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 SMU1Q2TAY7 513 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 UAP1L1Q3KQV9 507 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 ATP6AP1LQ52LC2 224 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 PYCR3Q53H96 274 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 TCHHL1Q5QJ38 904 aaPredicted RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 LIPJQ5W064 366 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 SLC23A3Q6PIS1 610 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 TRIM46Q7Z4K8 759 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 SNX32Q86XE0 403 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 RGL4Q8IZJ4 473 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 TFGQ92734 400 aaPredicted RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 USP7Q93009 1102 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 UTP4Q969X6 686 aaKnown RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 MCUR1Q96AQ8 359 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 RAD51AP1Q96B01 352 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 MYOCQ99972 504 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 CADM1Q9BY67 442 aaKnown RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 C6orf106Q9H6K1 298 aaPredicted RBP12.32□□□□□ -0.44
NELFE-209ENST00000488426 CAPN10Q9HC96 672 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 TM7SF3Q9NS93 570 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 GPRC5BQ9NZH0 403 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 KLQ9UEF7 1012 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 ASF1AQ9Y294 204 aa12.32□□□□□ -0.44
NELFE-209ENST00000488426 KCNE1BA0A087WTH5 132 aa12.31□□□□□ -0.44
NELFE-209ENST00000488426 LOC100653049A0A140TA62 436 aa12.31□□□□□ -0.44
NELFE-209ENST00000488426 POM121BA6NF01 834 aa12.31□□□□□ -0.44
NELFE-209ENST00000488426 PRR19A6NJB7 356 aa12.31□□□□□ -0.44
NELFE-209ENST00000488426 MANBAO00462 879 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms