RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 PTCH2Q9Y6C5 1203 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 STX16O14662 325 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 PTTG1O95997 202 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 APOA1P02647 267 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 SLC10A3P09131 477 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 PKMP14618 531 aaKnown RBP13.83□□□□□ -0.2
COL16A1-214ENST00000488128 HOXC13P31276 330 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 ZXDBP98169 803 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 IRF3Q14653 427 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 MS4A13Q5J8X5 152 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 CTSL3PQ5NE16 218 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 CAPN13Q6MZZ7 669 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-214ENST00000488128 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 PRSS48Q7RTY5 328 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 CYP4Z2PQ8N1L4 340 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 PPP1R2P1Q96PQ5 205 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 FYTTD1Q96QD9 318 aaKnown RBP13.83□□□□□ -0.2
COL16A1-214ENST00000488128 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
COL16A1-214ENST00000488128 RERGLQ9H628 205 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 RAD18Q9NS91 495 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-214ENST00000488128 GPRC5BQ9NZH0 403 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 SLC6A14Q9UN76 642 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 ANGPTL3Q9Y5C1 460 aa13.83□□□□□ -0.2
COL16A1-214ENST00000488128 NINQ8N4C6 2090 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 CENPXA8MT69 81 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 M0QZ92 97 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 TNFRSF10AO00220 468 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 RAMP2O60895 175 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 MED26O95402 600 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 ITGAMP11215 1152 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 TNFRSF1BP20333 461 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 TACR1P25103 407 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 PCSK1P29120 753 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 MC4RP32245 332 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 HTR3AP46098 478 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 PPP3CCP48454 512 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 SPANXN2Q5MJ10 180 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 GALNT7Q86SF2 657 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 FBLIM1Q8WUP2 373 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 YME1L1Q96TA2 773 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 ZYG11BQ9C0D3 744 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 MMP28Q9H239 520 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 CSNK1G1Q9HCP0 422 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF490Q9ULM2 529 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 WBP11Q9Y2W2 641 aaKnown RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 KRT87PA6NCN2 255 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 SAGE2PA6NJ88 616 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 SLAMF1Q13291 335 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 EIF4EBP2Q13542 120 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 RFX4Q33E94 735 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 KDM4DQ6B0I6 523 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 PDE12Q6L8Q7 609 aaKnown RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 RGL4Q8IZJ4 473 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 NKAPQ8N5F7 415 aaKnown RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 CLDN19Q8N6F1 224 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 TP53I13Q8NBR0 393 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-214ENST00000488128 OR7G1Q8NGA0 311 aa13.82□□□□□ -0.2
COL16A1-214ENST00000488128 RALGAPA2Q2PPJ7 1873 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 RGS13O14921 159 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 PTHP01270 115 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 NTRK1P04629 796 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 BMP1P13497 986 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 POU2F1P14859 743 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 NPRL3Q12980 569 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TAF1CQ15572 869 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TBRG1Q3YBR2 411 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 NEK10Q6ZWH5 1172 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 RNF175Q8N4F7 328 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 AADATQ8N5Z0 425 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 UTP15Q8TED0 518 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CEP19Q96LK0 163 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 PRM3Q9NNZ6 103 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 NDRG4Q9ULP0 352 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 DNMT3AQ9Y6K1 912 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CLDN24A6NM45 220 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SH3BGRLO75368 114 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 GLUD1P00367 558 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 IL18R1Q13478 541 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CAMK2GQ13555 558 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 GPR162Q16538 588 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CYP27C1Q4G0S4 372 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 Q5BKY6 102 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SNX20Q7Z614 316 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CACTIN-AS1Q8N1I8 211 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 UMODL1-AS1Q8N2C9 162 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 KLHDC9Q8NEP7 349 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 OR7D4Q8NG98 312 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 GPR150Q8NGU9 434 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms