RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 UBA6A0AVT1 1052 aaPredicted RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 FAM221AA4D161 298 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SDR42E2A6NKP2 422 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 FZD6O60353 706 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 MTX2O75431 263 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 C1QAP02745 245 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 UMODP07911 640 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 CBSLP0DN79 551 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 DNAJA1P31689 397 aaKnown RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 CBSP35520 551 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 NPY2RP49146 381 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 KPNA2P52292 529 aaKnown RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 CDH17Q12864 832 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SSPNQ14714 243 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SLC14A2Q15849 920 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 INSCQ1MX18 579 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SIRPB2Q5JXA9 342 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 B3GNTL1Q67FW5 361 aaPredicted RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 XKRXQ6PP77 449 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ABRAXAS1Q6UWZ7 409 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 UNC5AQ6ZN44 842 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ADGRG6Q86SQ4 1221 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 KMT5CQ86Y97 462 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 PALM2Q8IXS6 379 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SLC25A41Q8N5S1 370 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 DNAAF3Q8N9W5 541 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 NR4A3Q92570 626 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 CXorf40BQ96DE9 158 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 TRIB3Q96RU7 358 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SH3GL2Q99962 352 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ENKD1Q9H0I2 346 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 CXXC4Q9H2H0 198 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ACTR5Q9H9F9 607 aaPredicted RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 VPS37BQ9H9H4 285 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ARNT2Q9HBZ2 717 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 SLC6A20Q9NP91 592 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ZC3H7BQ9UGR2 993 aaKnown RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 PTRH2Q9Y3E5 179 aaKnown RBP9.47□□□□□ -0.89
SND1-213ENST00000486037 MAD1L1Q9Y6D9 718 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
SND1-213ENST00000486037 ANKRD12Q6UB98 2062 aa9.46□□□□□ -0.89
SND1-213ENST00000486037 A0A087WUV0 522 aaPredicted RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 A0A0J9YYE9 177 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 A0A1W2PQ67 120 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 OR5K3A6NET4 321 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 TMEM150CB9EJG8 249 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 H3BQF6 201 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 PEX12O00623 359 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 CHUKO15111 745 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 UNC5CO95185 931 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 CLDN14O95500 239 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 SYF2O95926 243 aaKnown RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 PRLP01236 227 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 TRBC1P01850 177 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 PYGLP06737 847 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 ZNF7P17097 686 aaPredicted RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 CES1P23141 567 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 MSLNQ13421 630 aaPredicted RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 GALNT3Q14435 633 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 SLC9A5Q14940 896 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 SLC1A5Q15758 541 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 C3AR1Q16581 482 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 KHDC1Q4VXA5 237 aaKnown RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 CEP85LQ5SZL2 805 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 ARMC12Q5T9G4 340 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 MLIPQ5VWP3 458 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 STEAP4Q687X5 459 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 CES3Q6UWW8 571 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 MEX3BQ6ZN04 569 aaKnown RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 C3orf62Q6ZUJ4 267 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 OR8K5Q8NH50 307 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 ADAMTS18Q8TE60 1221 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 FBF1Q8TES7 1133 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 MAGEB10Q96LZ2 347 aaPredicted RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 TREX2Q9BQ50 279 aaPredicted RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 TMEM109Q9BVC6 243 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 FSD1LQ9BXM9 530 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 TDRD1Q9BXT4 1180 aaKnown RBP9.46□□□□□ -0.9
SND1-213ENST00000486037 ACBD3Q9H3P7 528 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 ATP13A2Q9NQ11 1180 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 SOHLH2Q9NX45 425 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 BFARQ9NZS9 450 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 TINAGQ9UJW2 476 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 BTRCQ9Y297 605 aa9.46□□□□□ -0.9
SND1-213ENST00000486037 TCRBV9S1A1TA0A576 114 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 SLC9B1P1A6NJY1 282 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 AP3B1O00203 1094 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 ZBTB11O95625 1053 aaPredicted RBP9.45□□□□□ -0.9
SND1-213ENST00000486037 NDST3O95803 873 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 EPOP01588 193 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 CTSBP07858 339 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 GSTA2P09210 222 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 ZNF30P17039 623 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 PGAM1P18669 254 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 HLA-DPA1P20036 260 aa9.45□□□□□ -0.9
SND1-213ENST00000486037 CYP2A7P20853 494 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms