RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CD1DP15813 335 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 CMPK1P30085 196 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 AP1S2P56377 157 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 ATP6V0D1P61421 351 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 TAP2Q03519 686 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 NAE1Q13564 534 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 NAA30Q147X3 362 aaPredicted RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 PPP1R3AQ16821 1122 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 KIAA1614Q5VZ46 1190 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 CYB5D1Q6P9G0 228 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 AGTRAPQ6RW13 159 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 CDHR3Q6ZTQ4 885 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 ZFAND4Q86XD8 727 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 PROSER1Q86XN7 944 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 OR2L3Q8NG85 312 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 KCTD4Q8WVF5 259 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 N4BP2L2Q92802 583 aaPredicted RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 EXT2Q93063 718 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 CCDC77Q9BR77 488 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 PARD6BQ9BYG5 372 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 ASPSCR1Q9BZE9 553 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 VPS11Q9H270 941 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 FANCEQ9HB96 536 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 MRPS30Q9NP92 439 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 CCDC177Q9NQR7 707 aaPredicted RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 INTS7Q9NVH2 962 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 ZNF180Q9UJW8 692 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 TLK1Q9UKI8 766 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 NOVA2Q9UNW9 492 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 ACOT9Q9Y305 439 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 OARD1Q9Y530 152 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 PCDHGA3Q9Y5H0 932 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 PCM1Q15154 2024 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 ACACBO00763 2458 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 TPRP12270 2363 aaKnown RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 SDK2Q58EX2 2172 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 APC2O95996 2303 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 A0A087X1B8 175 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 A0A096LPK6 155 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 NCF1BA6NI72 391 aaPredicted RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 SMIM23A6NLE4 172 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 NCF1CA8MVU1 366 aaPredicted RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 NRP2O60462 931 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 KRT37O76014 449 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 CCNDBP1O95273 360 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 SHBGP04278 402 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 C2P06681 752 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 LTA4HP09960 611 aaKnown RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 NCF1P14598 390 aaPredicted RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 TFEBP19484 476 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 CNTFP26441 200 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 GCAP28676 217 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 YBX1P67809 324 aaKnown RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 DLG1Q12959 904 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 PRAMEF13Q5VWM6 474 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 ICE2Q659A1 982 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 FIGLAQ6QHK4 219 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 ADCK2Q7Z695 626 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 PPP1R3BQ86XI6 285 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 LRRC56Q8IYG6 542 aaPredicted RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 OR2A1Q8NGT9 310 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 AENQ8WTP8 325 aaKnown RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 ATL1Q8WXF7 558 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 PTERQ96BW5 349 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 FBXL8Q96CD0 374 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 TCTN2Q96GX1 697 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 UBXN10Q96LJ8 280 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 DHRS4Q9BTZ2 278 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 ULBP3Q9BZM4 244 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 ALG9Q9H6U8 611 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 FAM60AQ9NP50 221 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 SLC6A20Q9NP91 592 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 PSMC3IPQ9P2W1 217 aaPredicted RBP11.4□□□□□ -0.58
HPS4-214ENST00000485842 RNF112Q9ULX5 631 aa11.4□□□□□ -0.58
HPS4-214ENST00000485842 TAF4O00268 1085 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 HCRTR1O43613 425 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 KIAA0754O94854 1291 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 FKBP9O95302 570 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 TIAF1O95411 115 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 S100BP04271 92 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 ANXA5P08758 320 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 FGF5P12034 268 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 HSD17B3P37058 310 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 GRIA3P42263 894 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 GLRBP48167 497 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 ACACAQ13085 2346 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 IL11RAQ14626 422 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 OR4D1Q15615 310 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 ST3GAL2Q16842 350 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.39□□□□□ -0.59
HPS4-214ENST00000485842 LGSNQ5TDP6 509 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 FCRL6Q6DN72 434 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
HPS4-214ENST00000485842 EMBQ6PCB8 327 aa11.39□□□□□ -0.59
HPS4-214ENST00000485842 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms