RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 GMPRP36959 345 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 GRIA3P42263 894 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 TSTA3Q13630 321 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 SLMAPQ14BN4 828 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 PPP1R3AQ16821 1122 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 FIGLAQ6QHK4 219 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 C19orf48Q6RUI8 117 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 CMC1Q7Z7K0 106 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 VASH2Q86V25 355 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 BPHLQ86WA6 291 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 SPATA6LQ8N4H0 392 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 DNAJC22Q8N4W6 341 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 UHMK1Q8TAS1 419 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 TSPAN17Q96FV3 270 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 TXLNGYQ9BZA5 131 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 UNKQ9C0B0 810 aaKnown RBP13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 FANCEQ9HB96 536 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 SYTL2Q9HCH5 934 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 SLC6A20Q9NP91 592 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 WDR70Q9NW82 654 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 KLK4Q9Y5K2 254 aa13.06□□□□□ -0.32
SOX2-OT-209ENST00000485035 APC2O95996 2303 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 TPRP12270 2363 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 IGKV1-8A0A0C4DH67 115 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 H3BMH7 237 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 EFSO43281 561 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 MAP3K7O43318 606 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 SCRG1O75711 98 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 FKBP9O95302 570 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 CCDC166P0CW27 439 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 RAB10P61026 200 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 TBPL1P62380 186 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 UAP1Q16222 522 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ZXDCQ2QGD7 858 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 COL28A1Q2UY09 1125 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 AGTRAPQ6RW13 159 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 NLGN4XQ8N0W4 816 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 SLC38A9Q8NBW4 561 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 GALNT6Q8NCL4 622 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 NLGN4YQ8NFZ3 816 aaPredicted RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 SLC44A1Q8WWI5 657 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ANKRD7Q92527 254 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 DERL2Q9GZP9 239 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ANKZF1Q9H8Y5 726 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ABCF3Q9NUQ8 709 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 INTS7Q9NVH2 962 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 ARL15Q9NXU5 204 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 UTP6Q9NYH9 597 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 TAC3Q9UHF0 121 aa13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 NOVA2Q9UNW9 492 aaKnown RBP13.05□□□□□ -0.32
SOX2-OT-209ENST00000485035 OR2A25A4D2G3 310 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 TARM1B6A8C7 271 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CTSVO60911 334 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 NTRK1P04629 796 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 SLC35E2BP0CK96 405 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 WT1P19544 449 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 TNFRSF8P28908 595 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CMPK1P30085 196 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 STAT5AP42229 794 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CSRP3P50461 194 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 PMS2P54278 862 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 ITGA1P56199 1179 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 AP1S2P56377 157 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 PRDX1Q06830 199 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 MAP7Q14244 749 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 TSNQ15631 228 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 MROH9Q5TGP6 573 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 BROXQ5VW32 411 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 ICE2Q659A1 982 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 C6orf15Q6UXA7 325 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 IL22RA1Q8N6P7 574 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 EIF1ADQ8N9N8 165 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 ZUFSPQ96AP4 578 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 UBXN10Q96LJ8 280 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CCNL2Q96S94 520 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 PAFAH2Q99487 392 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 DPH7Q9BTV6 452 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 ATG10Q9H0Y0 220 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CPNE5Q9HCH3 593 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 MRPS30Q9NP92 439 aaKnown RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CCDC177Q9NQR7 707 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 CTNNAL1Q9UBT7 734 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 PLCL2Q9UPR0 1127 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 PCDHB3Q9Y5E6 796 aa13.04□□□□□ -0.32
SOX2-OT-209ENST00000485035 A0A087WUV0 522 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms