RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TAMM41Q96BW9 452 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 C19orf25Q9UFG5 118 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 WNT9AO14904 365 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EOMESO95936 686 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 ASB18Q6ZVZ8 466 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 OR6K2Q8NGY2 324 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 CEP295NLQ96MC4 621 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 GPR20Q99678 358 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 EFCAB11Q9BUY7 163 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 NRG1Q02297 640 aaPredicted RBP9.35□□□□□ -0.91
VEGFA-212ENST00000480614 DENND6BQ8NEG7 585 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TOP1MTQ969P6 601 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 PLEKHA6Q9Y2H5 1048 aa9.35□□□□□ -0.91
VEGFA-212ENST00000480614 TISP43B9A030 160 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 M0R036 132 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DUSP11O75319 330 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CBSLP0DN79 551 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CBSP35520 551 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CAPZA1P52907 286 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 BRAT1Q6PJG6 821 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 OTOP3Q7RTS5 596 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 OR5B17Q8NGF7 314 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NR2E1Q9Y466 385 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 KCNU1A8MYU2 1149 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DISC1C4P0D8 188 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NPIPA5E9PKD4 350 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PSKH1P11801 424 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 FAM76BQ5HYJ3 339 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PRPF38BQ5VTL8 546 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 P4HA3Q7Z4N8 544 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 OR8H3Q8N146 312 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 LRRN4CLQ8ND94 238 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 SHDQ96IW2 340 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 HNRNPABQ99729 332 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PDZD7Q9H5P4 517 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NPIPA1Q9UND3 350 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NEMP2A6NFY4 417 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 BPNT1O95861 308 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 BNIP1Q12981 228 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 OCLNQ16625 522 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 TMEM220Q6QAJ8 160 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF676Q8N7Q3 588 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 B3GNT4Q9C0J1 378 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 RNF121Q9H920 327 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DNAJB9Q9UBS3 223 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF99A8MXY4 864 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 H1F0P07305 194 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 GSCP56915 257 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PON3Q15166 354 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF782Q6ZMW2 699 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DQX1Q8TE96 717 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DUSP26Q9BV47 211 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 AHCYP23526 432 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CXCR1P25024 350 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 LRIF1Q5T3J3 769 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 GADD45GO95257 159 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ICAM3P32942 547 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DSC2Q02487 901 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 FOXM1Q08050 763 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZCCHC10Q8TBK6 192 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 OSER1Q9NX31 292 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 HEATR5BQ9P2D3 2071 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PHLPP1O60346 1717 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 GLP1RP43220 463 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DCDC1P59894 354 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PUM1Q14671 1186 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■□□ 14.8
VEGFA-212ENST00000480614 SDHAF4Q5VUM1 108 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 KCNK18Q7Z418 384 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NDC1Q9BTX1 674 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ABCG8Q9H221 673 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ADGRB1O14514 1584 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 TTC34A8MYJ7 566 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ARL6IP5O75915 188 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ARL2P36404 184 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 VMACQ2NL98 169 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DEFB115Q30KQ5 88 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 NXPE1Q8N323 547 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF709Q8N972 641 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CIB1Q99828 191 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ATG10Q9H0Y0 220 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 TMPRSS11EQ9UL52 423 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 UBR2Q8IWV8 1755 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 GOT2P00505 430 aaKnown RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 ZNF41P51814 821 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 PGDP52209 483 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 SCARB2Q14108 478 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 DRICH1Q6PGQ1 229 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-212ENST00000480614 CAMKVQ8NCB2 501 aa9.34□□□□□ -0.91
VEGFA-212ENST00000480614 AQP12BA6NM10 295 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 APOL3O95236 402 aa9.33□□□□□ -0.92
VEGFA-212ENST00000480614 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms