RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 TTC29Q8NA56 475 aaPredicted RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 POGLUT1Q8NBL1 392 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
USP11-208ENST00000480104 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UGT1A7Q9HAW7 530 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UGT1A10Q9HAW8 530 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 UGT1A8Q9HAW9 530 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 ADAM22Q9P0K1 906 aa11.22□□□□□ -0.61
USP11-208ENST00000480104 A0A087X1B8 175 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 TCRBV5S1A1TA0A578 114 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 ANKRD62A6NC57 917 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 CES2O00748 559 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 AURKAO14965 403 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 GOSR1O95249 250 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 HLA-DQB2P05538 268 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 NEFLP07196 543 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 MMP2P08253 660 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 AKT1P31749 480 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 CD86P42081 329 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 CHRNA4P43681 627 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 HCAR3P49019 387 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 ASCL1P50553 236 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 EFNA3P52797 238 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 TAZQ16635 292 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 ZNF468Q5VIY5 522 aaPredicted RBP11.21□□□□□ -0.61
USP11-208ENST00000480104 PLAG1Q6DJT9 500 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 ZNF585AQ6P3V2 769 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 SLC13A5Q86YT5 568 aaPredicted RBP11.21□□□□□ -0.61
USP11-208ENST00000480104 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 SHISA5Q8N114 240 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 CCM2Q9BSQ5 444 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.61
USP11-208ENST00000480104 THAP2Q9H0W7 228 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 MVB12BQ9H7P6 319 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 KCNK13Q9HB14 408 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 IL26Q9NPH9 171 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 RBM22Q9NW64 420 aaKnown RBP eCLIP11.21□□□□□ -0.61
USP11-208ENST00000480104 CFAP45Q9UL16 551 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
USP11-208ENST00000480104 IGHV3-20A0A0C4DH32 117 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 FITM1A5D6W6 292 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 FIGNL2A6NMB9 653 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 TLX2O43763 284 aaPredicted RBP11.2□□□□□ -0.62
USP11-208ENST00000480104 STATHP02808 62 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 TP53P04637 393 aaPredicted RBP11.2□□□□□ -0.62
USP11-208ENST00000480104 CHRNB2P17787 502 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 PEBP1P30086 187 aaKnown RBP11.2□□□□□ -0.62
USP11-208ENST00000480104 SHMT2P34897 504 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 GRIA3P42263 894 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 BOP1Q14137 746 aaKnown RBP11.2□□□□□ -0.62
USP11-208ENST00000480104 TCTE1Q5JU00 501 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 ATL3Q6DD88 541 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 PRMT9Q6P2P2 845 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 TMEM205Q6UW68 189 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 FAM151BQ6UXP7 276 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 OR52N2Q8NGI0 321 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 MAML1Q92585 1016 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 ZNF285Q96NJ3 590 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 TRIB3Q96RU7 358 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 CCL19Q99731 98 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 PLCD4Q9BRC7 762 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 LRTM1Q9HBL6 345 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 MAGEE1Q9HCI5 957 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 C14orf105Q9NVL8 296 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 STOX2Q9P2F5 926 aaPredicted RBP11.2□□□□□ -0.62
USP11-208ENST00000480104 TRPC4Q9UBN4 977 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 B4GALT7Q9UBV7 327 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 ZNF281Q9Y2X9 895 aa11.2□□□□□ -0.62
USP11-208ENST00000480104 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 H3BRJ5 948 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 DESP17661 470 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 MSH3P20585 1137 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 PRKCIP41743 596 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 NSFP46459 744 aaKnown RBP11.19□□□□□ -0.62
USP11-208ENST00000480104 ZNF165P49910 485 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 CDR2Q01850 454 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 TNK1Q13470 666 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 CAPRIN1Q14444 709 aaKnown RBP11.19□□□□□ -0.62
USP11-208ENST00000480104 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 FAM214AQ32MH5 1076 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 FBXL19-AS1Q494R0 122 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 BCL7AQ4VC05 210 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 ISM2Q6H9L7 571 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 DPY19L2P1Q6NXN4 242 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 NT5DC3Q86UY8 548 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 ZNF227Q86WZ6 799 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 PPP1R14CQ8TAE6 165 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 LRRC46Q96FV0 321 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 SELENOSQ9BQE4 189 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 YIPF2Q9BWQ6 316 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 OR52A5Q9H2C5 316 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 ENAMQ9NRM1 1142 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 SPO11Q9Y5K1 396 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms