RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 MENTQ9BUN1 341 aa16.5■□□□□ 0.23
HMGN1-212ENST00000479586 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
HMGN1-212ENST00000479586 CHMP5Q9NZZ3 219 aa16.5■□□□□ 0.23
HMGN1-212ENST00000479586 FLNAP21333 2647 aaKnown RBP16.5■□□□□ 0.23
HMGN1-212ENST00000479586 GTF3C1Q12789 2109 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 ABCA4P78363 2273 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 IGLV3-12A0A075B6K2 115 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 SLC5A10A0PJK1 596 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 IDSB3KWA1 339 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 NPIPA5E9PKD4 350 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 CST8O60676 142 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 MYBL2P10244 700 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 FBLP22087 321 aaKnown RBP16.49■□□□□ 0.23
HMGN1-212ENST00000479586 CXCR2P25025 360 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 CDKN2BP42772 138 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 AKAP6Q13023 2319 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 DBN1Q16643 649 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 KAZNQ674X7 775 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 FRMPD2BQ6IN97 320 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 PRMT9Q6P2P2 845 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 TGIF2LYQ8IUE0 185 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 CA5BP1Q8WTZ4 195 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 SDCCAG3Q96C92 435 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 HAUS1Q96CS2 278 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 QKIQ96PU8 341 aaKnown RBP eCLIP16.49■□□□□ 0.23
HMGN1-212ENST00000479586 GBA3Q9H227 469 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 INTS7Q9NVH2 962 aaKnown RBP16.49■□□□□ 0.23
HMGN1-212ENST00000479586 STMN3Q9NZ72 180 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 SMARCAL1Q9NZC9 954 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 TNFRSF10DQ9UBN6 386 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 NPIPA1Q9UND3 350 aa16.49■□□□□ 0.23
HMGN1-212ENST00000479586 INTS1Q8N201 2190 aaKnown RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 FAM221AA4D161 298 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 KDM1AO60341 852 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 NRP2O60462 931 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 FAM155BO75949 473 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 ANXA9O76027 345 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 AP2A2O94973 939 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 TNNT1P13805 278 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 IGFBP2P18065 325 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 DNAJA1P31689 397 aaKnown RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 IST1P53990 364 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 ALDH6A1Q02252 535 aaKnown RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 PCOLCEQ15113 449 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 SYTL3Q4VX76 610 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 KRTCAP3Q53RY4 240 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 PHF10Q8WUB8 498 aaKnown RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 C10orf90Q96M02 699 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 DMRTA2Q96SC8 542 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 HES7Q9BYE0 225 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 GSX1Q9H4S2 264 aaPredicted RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 C10orf88Q9H8K7 445 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 ZC3H7BQ9UGR2 993 aaKnown RBP16.48■□□□□ 0.23
HMGN1-212ENST00000479586 TRHDEQ9UKU6 1024 aa16.48■□□□□ 0.23
HMGN1-212ENST00000479586 LOC105369274A0A096LPK9 316 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 LOC102723532A0A0G2JNH3 316 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 ADAM10O14672 748 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 S1PR4O95977 384 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 ABOP16442 354 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 KLK2P20151 261 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 CD9P21926 228 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 ST13P50502 369 aaKnown RBP16.47■□□□□ 0.23
HMGN1-212ENST00000479586 CSE1LP55060 971 aaKnown RBP16.47■□□□□ 0.23
HMGN1-212ENST00000479586 HSF1Q00613 529 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 TFDP2Q14188 446 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
HMGN1-212ENST00000479586 TMEM200AQ86VY9 491 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 DOLPP1Q86YN1 238 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 OR4N4Q8N0Y3 316 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 P3H4Q92791 437 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 SLC22A18Q96BI1 424 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 ZNF700Q9H0M5 742 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 KLHL1Q9NR64 748 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 TRPC4Q9UBN4 977 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 PPT2Q9UMR5 302 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 VPS13CQ709C8 3753 aa16.47■□□□□ 0.23
HMGN1-212ENST00000479586 LOC102723996A0A087X1L8 192 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 TTI1O43156 1089 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 ZRANB2O95218 330 aaKnown RBP eCLIP16.46■□□□□ 0.23
HMGN1-212ENST00000479586 FTH1P02794 183 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 EIF2S1P05198 315 aaKnown RBP16.46■□□□□ 0.23
HMGN1-212ENST00000479586 HEXBP07686 556 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 EFNA3P52797 238 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 GRB7Q14451 532 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 NR1I3Q14994 352 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 TAZQ16635 292 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 LRRC38Q5VT99 294 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 FCRLBQ6BAA4 426 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 DENND5AQ6IQ26 1287 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 CHERPQ8IWX8 916 aaKnown RBP16.46■□□□□ 0.23
HMGN1-212ENST00000479586 BEST3Q8N1M1 668 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 SLC35G2Q8TBE7 412 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 SIGLEC12Q96PQ1 595 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 C19orf43Q9BQ61 176 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 YIPF2Q9BWQ6 316 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 CXXC4Q9H2H0 198 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms