RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RNPC3Q96LT9 517 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 SLC22A4Q9H015 551 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 OSBPL5Q9H0X9 879 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 IL20RAQ9UHF4 553 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NLRP1Q9C000 1473 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ZNF670-ZNF695F2Z2N8 137 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 LRATO95237 230 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SNAPINO95295 136 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 VIPP01282 170 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CLEC3BP05452 202 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 C8GP07360 202 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RHCEP18577 417 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 EPHX2P34913 555 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MPIP34949 423 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 HNF1BP35680 557 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GALNT1Q10472 559 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 HEPACAMQ14CZ8 416 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CMTM3Q96MX0 182 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CSPG4P5Q96PW8 444 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MAF1Q9H063 256 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MLXIPLQ9NP71 852 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 IL26Q9NPH9 171 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MTF2Q9Y483 593 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 KLHL33A6NCF5 533 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 B3GALNT1O75752 331 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GLI1P08151 1106 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TGM4P49221 684 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PTENP60484 403 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GPRC6AQ5T6X5 926 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 FAXCQ5TGI0 409 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ZNF746Q6NUN9 644 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 ANKRD23Q86SG2 305 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NRSN1Q8IZ57 195 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DNASE1L2Q92874 299 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PPCDCQ96CD2 204 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 FCRL4Q96PJ5 515 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TBL1XR1Q9BZK7 514 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RNF32Q9H0A6 362 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TREM1Q9NP99 234 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SLC35D1Q9NTN3 355 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SERTAD4Q9NUC0 356 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GOLT1BQ9Y3E0 138 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 HSPB11Q9Y547 144 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PCM1Q15154 2024 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 E7ENX8 843 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 UGDHO60701 494 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 DUSP11O75319 330 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 UROSP10746 265 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LIPCP11150 499 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CSNK2A2P19784 350 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 SDHBP21912 280 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 EPHB2P29323 1055 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 WEE1P30291 646 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CSN1S1P47710 185 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TAS2R46P59540 309 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MC1RQ01726 317 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TAP2Q03519 686 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ARHGAP19Q14CB8 494 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PRKD1Q15139 912 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 NPTX1Q15818 432 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MAPKAPK3Q16644 382 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 C15orf59Q2T9L4 293 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 CHRFAM7AQ494W8 412 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC30A6Q6NXT4 461 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CES3Q6UWW8 571 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR5T2Q8NGG2 359 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR6T1Q8NGN1 323 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ACMSDQ8TDX5 336 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 IPCEF1Q8WWN9 437 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 HOXB13Q92826 284 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC38A3Q99624 504 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HOPXQ9BPY8 73 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 MRIQ9BWK5 157 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PPA2Q9H2U2 334 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PCIF1Q9H4Z3 704 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC52A2Q9HAB3 445 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 FANCLQ9NW38 375 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 EIF2B4Q9UI10 523 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 MRPS7Q9Y2R9 242 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 CDH10Q9Y6N8 788 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ASTN2O75129 1339 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 C13orf42A0A1B0GVH6 325 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 FAM196BA6NMK8 535 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CDK2AP1O14519 115 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RNF13O43567 381 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 BCAS2O75934 225 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC2A2P11168 524 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 CLCN5P51795 746 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PPP2CBP62714 309 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HGSNATQ68CP4 663 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ENPP6Q6UWR7 440 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNF410Q86VK4 478 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 FEZF2Q8TBJ5 459 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TSSK2Q96PF2 358 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 C11orf70Q9BRQ4 267 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SNTG2Q9NY99 539 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 DLGAP2Q9P1A6 1054 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LRFN1Q9P244 771 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms