RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TMEM150CB9EJG8 249 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 SLC16A5O15375 505 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 KLK10O43240 276 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 RIPK2O43353 540 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HCRTR1O43613 425 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PRICKLE3O43900 615 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 NRP2O60462 931 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 STK17BO94768 372 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 WISP3O95389 354 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 GUCA1CO95843 209 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 INHBAP08476 426 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HIST1H2AGP0C0S8 130 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 CCDC166P0CW27 439 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF28P17035 718 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HIST1H2ADP20671 130 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ITPKBP27987 946 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 RPA3P35244 121 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 GRIA3P42263 894 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 RAB10P61026 200 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 VSNL1P62760 191 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TUBB4BP68371 445 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ACY1Q03154 408 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ILF2Q12905 390 aaKnown RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 CLN3Q13286 438 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 CSHL1Q14406 222 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TSNQ15631 228 aaKnown RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 THEMIS2Q5TEJ8 643 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 KIAA1614Q5VZ46 1190 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TRMT10CQ7L0Y3 403 aaKnown RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PPP1R3BQ86XI6 285 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 OR2L3Q8NG85 312 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 OR2A1Q8NGT9 310 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 SLC44A1Q8WWI5 657 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ALKBH8Q96BT7 664 aaKnown RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF501Q96CX3 271 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 MED8Q96G25 268 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TCTN2Q96GX1 697 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HIST1H2AHQ96KK5 128 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 PAFAH2Q99487 392 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 HIST1H2AJQ99878 128 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 H2AFJQ9BTM1 129 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TXLNGYQ9BZA5 131 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ASPSCR1Q9BZE9 553 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ULBP3Q9BZM4 244 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ATG10Q9H0Y0 220 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 ARL15Q9NXU5 204 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 STOX2Q9P2F5 926 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-222ENST00000478095 CTNNAL1Q9UBT7 734 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 RARRES3Q9UL19 164 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 CELSR3Q9NYQ7 3312 aa9.89□□□□□ -0.83
HDAC6-222ENST00000478095 TPRP12270 2363 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 PIKFYVEQ9Y2I7 2098 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 EXOC1LA0A1B0GW35 172 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 ZNF839A8K0R7 811 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 E7ENX8 843 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 STMND1H3BQB6 276 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 RRP8O43159 456 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 CTSBP07858 339 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 ABHD2P08910 425 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SLC35E2BP0CK96 405 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 LIPCP11150 499 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 FGF5P12034 268 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 CD1DP15813 335 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 TNFRSF8P28908 595 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 HSD17B2P37059 387 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 MSH2P43246 934 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 TBPL1P62380 186 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 IRF9Q00978 393 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 TAP2Q03519 686 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SRSF6Q13247 344 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SLC29A2Q14542 456 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 IL11RAQ14626 422 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 ARHGAP19Q14CB8 494 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 PPP1R3AQ16821 1122 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 FCRL6Q6DN72 434 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 AGTRAPQ6RW13 159 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SBSNQ6UWP8 590 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 LRRC69Q6ZNQ3 347 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 FRA10AC1Q70Z53 315 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 VASH2Q86V25 355 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SPACA3Q8IXA5 215 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 LRRC56Q8IYG6 542 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 EIF1ADQ8N9N8 165 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 OR1L3Q8NH93 324 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 UBLCP1Q8WVY7 318 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 N4BP2L2Q92802 583 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 PDLIM5Q96HC4 596 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 CCDC138Q96M89 665 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 FCRL4Q96PJ5 515 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 TEFMQ96QE5 360 aaKnown RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 ZPBPQ9BS86 351 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 TRIM54Q9BYV2 358 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 EPB41L4BQ9H329 900 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 FANCEQ9HB96 536 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SLC6A20Q9NP91 592 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 CCDC177Q9NQR7 707 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-222ENST00000478095 SNX15Q9NRS6 342 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms