RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 IMPA1P29218 277 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 LTBRP36941 435 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 HTR6P50406 440 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 CLCN2P51788 898 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 SLC7A2P52569 658 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 METAP1P53582 386 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 UFM1P61960 85 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 INSM1Q01101 510 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 RHDQ02161 417 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 SRSF11Q05519 484 aaKnown RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 SMAD4Q13485 552 aaKnown RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 NAE1Q13564 534 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 PWP1Q13610 501 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 INPP5AQ14642 412 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 KIAA0040Q15053 153 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 TLR1Q15399 786 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 CPSF6Q16630 551 aaKnown RBP eCLIP7.7□□□□□ -1.18
VMA21-203ENST00000477649 MUM1Q2TAK8 710 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 LRIT3Q3SXY7 679 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 VPS26BQ4G0F5 336 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 TMEM259Q4ZIN3 620 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 RFTN2Q52LD8 501 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 USP39Q53GS9 565 aaKnown RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 SPIN4Q56A73 249 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 XKR6Q5GH73 641 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 MTX3Q5HYI7 312 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 TCHHL1Q5QJ38 904 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 ATG9BQ674R7 924 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 MED27Q6P2C8 311 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 LCTLQ6UWM7 567 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 FKBP9P1Q75LS8 142 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 C11orf96Q7Z7L8 435 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 DHFR2Q86XF0 187 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 PROSER1Q86XN7 944 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 ZNF547Q8IVP9 402 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 SYTL1Q8IYJ3 562 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D21Q8IYX1 336 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 KRT78Q8N1N4 520 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 PQLC1Q8N2U9 271 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 TP53I13Q8NBR0 393 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 OR9I1Q8NGQ6 314 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 GANCQ8TET4 914 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 SLC13A3Q8WWT9 602 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 DNAJC9Q8WXX5 260 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 CXorf40BQ96DE9 158 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 SLC17A9Q9BYT1 436 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 ACPTQ9BZG2 426 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 OR52A5Q9H2C5 316 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 VCXQ9H320 206 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 CLMPQ9H6B4 373 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 CCDC177Q9NQR7 707 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 SPATA6Q9NWH7 488 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 ACTR3BQ9P1U1 418 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 VPS29Q9UBQ0 182 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 MBD1Q9UIS9 605 aaPredicted RBP7.7□□□□□ -1.18
VMA21-203ENST00000477649 SLC17A4Q9Y2C5 497 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 COQ6Q9Y2Z9 468 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 PTGDR2Q9Y5Y4 395 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 HEBP2Q9Y5Z4 205 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 MYO7AQ13402 2215 aa7.7□□□□□ -1.18
VMA21-203ENST00000477649 EYSQ5T1H1 3165 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PRORSD1PA6NEY8 169 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 TMEM202A6NGA9 273 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 H0YJX3 145 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 K7ESM1 405 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 FXYD1O00168 92 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 MAN2B1O00754 1011 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 FFAR3O14843 346 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GPR42O15529 346 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GMNNO75496 209 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 BAG2O95816 211 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PCCBP05166 539 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GPIP06744 558 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SLC35G4P0C7Q5 338 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 C1GALT1C1LP0DN25 315 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ERGP11308 486 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ACADMP11310 421 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 FCGR1AP12314 374 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 BCKDHAP12694 445 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 XRCC1P18887 633 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 ATP6V1C1P21283 382 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ITPKAP23677 461 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SLC6A2P23975 617 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GSTM2P28161 218 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 NDUFS1P28331 727 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 HTR1EP28566 365 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 SLC7A1P30825 629 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PIK3CBP42338 1070 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 GSTM5P46439 218 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 PREPP48147 710 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 HSPA13P48723 471 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 CLCNKAP51800 687 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 ADPRHP54922 357 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 KIAA1024LP59773 190 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 DLX2Q07687 328 aaPredicted RBP7.69□□□□□ -1.18
VMA21-203ENST00000477649 DOC2AQ14183 400 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 IRF4Q15306 451 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 TAF11Q15544 211 aa7.69□□□□□ -1.18
VMA21-203ENST00000477649 FXNQ16595 210 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms