RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 STARD8Q92502 1023 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 DLG3Q92796 817 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 FCRL4Q96PJ5 515 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 CYTH2Q99418 400 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 ACSS3Q9H6R3 686 aa17■□□□□ 0.31
PTPN7-209ENST00000477554 E5RI56 91 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 F8W8V4 182 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 MATN2O00339 956 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 RHDQ02161 417 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 MAP7Q14244 749 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 CASP8Q14790 479 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 PTCHD3Q3KNS1 767 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 TEDDM1Q5T9Z0 273 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 C16orf46Q6P387 395 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 SUSD1Q6UWL2 747 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 CARFQ8N187 725 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 SLC45A3Q96JT2 553 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 PKP4Q99569 1192 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 SMYD2Q9NRG4 433 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 NSMCE4AQ9NXX6 385 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 ZFATQ9P243 1243 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 ADAMTS6Q9UKP5 1117 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
PTPN7-209ENST00000477554 FAM159BA6NKW6 160 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 H3BMM5 538 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 KATNA1O75449 491 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 PSIP1O75475 530 aaKnown RBP16.98■□□□□ 0.31
PTPN7-209ENST00000477554 TCN2P20062 427 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 RORAP35398 523 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 NAB1Q13506 487 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 KIR2DS3Q14952 304 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 SLC5A12Q1EHB4 618 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 TMTC4Q5T4D3 741 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 UBAP2Q5T6F2 1119 aaKnown RBP16.98■□□□□ 0.31
PTPN7-209ENST00000477554 MBOAT1Q6ZNC8 495 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 CNTN4Q8IWV2 1026 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 DNAJC22Q8N4W6 341 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 UHMK1Q8TAS1 419 aaKnown RBP16.98■□□□□ 0.31
PTPN7-209ENST00000477554 KCNJ9Q92806 393 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 OLFM1Q99784 485 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 MIPEPQ99797 713 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 ACAT2Q9BWD1 397 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 CHST8Q9H2A9 424 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 PPCSQ9HAB8 311 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 STARD5Q9NSY2 213 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 PCMTD2Q9NV79 361 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 FETUBQ9UGM5 382 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 IKZF3Q9UKT9 509 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 SLC39A10Q9ULF5 831 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 PLAAQ9Y263 795 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 DHRS7Q9Y394 339 aa16.98■□□□□ 0.31
PTPN7-209ENST00000477554 EXOC1LA0A1B0GW35 172 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 KPNA5O15131 536 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 ZNF749O43361 778 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 CTSVO60911 334 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 CPNE3O75131 537 aaKnown RBP16.97■□□□□ 0.31
PTPN7-209ENST00000477554 CAPN1P07384 714 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 CDC20Q12834 499 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 DNASE1L3Q13609 305 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 ERV3-1Q14264 604 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 KBTBD12Q3ZCT8 623 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 IQCKQ8N0W5 287 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 EEF1AKMT1Q8WVE0 214 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 VIPAS39Q9H9C1 493 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 PADI1Q9ULC6 663 aa16.97■□□□□ 0.31
PTPN7-209ENST00000477554 PFDN6O15212 129 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 MED26O95402 600 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 CBSLP0DN79 551 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ATP5DP30049 168 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 CBSP35520 551 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 IL10RAQ13651 578 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 C1orf189Q5VU69 101 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ZNF385CQ66K41 422 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 PAQR3Q6TCH7 311 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 LRIG3Q6UXM1 1119 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ZNF517Q6ZMY9 492 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 CTAGE3PQ8IX95 158 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 DSELQ8IZU8 1212 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 CNPY4Q8N129 248 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ZNF843Q8N446 348 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ZNF655Q8N720 491 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 OR2A1Q8NGT9 310 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 MR1Q95460 341 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 RAD51AP1Q96B01 352 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ROPN1BQ9BZX4 212 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ACTL8Q9H568 366 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ROPN1Q9HAT0 212 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 SLC6A20Q9NP91 592 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 STOX2Q9P2F5 926 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 DHCR7Q9UBM7 475 aaKnown RBP16.96■□□□□ 0.31
PTPN7-209ENST00000477554 IKBKGQ9Y6K9 419 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 ANKRD12Q6UB98 2062 aa16.96■□□□□ 0.31
PTPN7-209ENST00000477554 IGKV1-8A0A0C4DH67 115 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF891A8MT65 544 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 CXorf49A8MYA2 514 aaPredicted RBP16.96■□□□□ 0.3
PTPN7-209ENST00000477554 MYO1CO00159 1063 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 MEN1O00255 615 aa16.96■□□□□ 0.3
PTPN7-209ENST00000477554 RPN2P04844 631 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms