RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	ZNF41	P51814	821 aa	Predicted RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	LBX1	P52954	281 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	LIMK1	P53667	647 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	UBASH3A	P57075	661 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	SNRPD1	P62314	119 aa	Known RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	GCNT1	Q02742	428 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	HNRNPD	Q14103	355 aa	Known RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	NPTX1	Q15818	432 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	SLC35D3	Q5M8T2	416 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	C20orf194	Q5TEA3	1177 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	ADAM5	Q6NVV9	412 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	SLFN11	Q7Z7L1	901 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	KIRREL3	Q8IZU9	778 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	RYBP	Q8N488	228 aa	Predicted RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	ANKRD13C	Q8N6S4	541 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	IQUB	Q8NA54	791 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	DDHD1	Q8NEL9	900 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	OR10Q1	Q8NGQ4	319 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	DYRK2	Q92630	601 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	PROX1	Q92786	737 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	FAM71F1	Q96KD3	344 aa	Predicted RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	LRRC3B	Q96PB8	259 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	SLC2A11	Q9BYW1	496 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	SHARPIN	Q9H0F6	387 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	WDR13	Q9H1Z4	485 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	FZD8	Q9H461	694 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447		Q9H8V8	135 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	XAB2	Q9HCS7	855 aa	Known RBP	2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	CHST11	Q9NPF2	352 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	C2orf42	Q9NWW7	574 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	EPHA6	Q9UF33	1036 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447	LIPG	Q9Y5X9	500 aa		2.97	□□□□□ -1.93
TARDBP-208	ENST00000477447		A0A087WW49	117 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	PSMD14	O00487	310 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	AP2A2	O94973	939 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	GSR	P00390	522 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	RAF1	P04049	648 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	FAM157C	P0CG43	387 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	PTAFR	P25105	342 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	NPY4R	P50391	375 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	HERV-K104	P61576	105 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	KLC1	Q07866	573 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ITGA9	Q13797	1035 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	MRGPRG-AS1	Q2M3A8	158 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ZFP69	Q49AA0	526 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	PWWP2B	Q6NUJ5	590 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	TMEM207	Q6UWW9	146 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447		Q6ZSR9	355 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ERN2	Q76MJ5	926 aa	Known RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	NOTCH2NL	Q7Z3S9	236 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	CCAR2	Q8N163	923 aa	Known RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	NDUFAF2	Q8N183	169 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	RAB42	Q8N4Z0	105 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	KLHDC1	Q8N7A1	406 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	NIPA2	Q8N8Q9	360 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ADAD2	Q8NCV1	583 aa	Known RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447		Q8NFD4	153 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	KCNE4	Q8WWG9	221 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	EXT2	Q93063	718 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	SIPA1	Q96FS4	1042 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	RMDN2	Q96LZ7	410 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	CCDC3	Q9BQI4	270 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	KATNB1	Q9BVA0	655 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	GTPBP2	Q9BX10	602 aa	Known RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ZMYND12	Q9H0C1	365 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	CPVL	Q9H3G5	476 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	TLE6	Q9H808	572 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	TRPV4	Q9HBA0	871 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	FGF22	Q9HCT0	170 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	PPAN	Q9NQ55	473 aa	Known RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	TXNDC16	Q9P2K2	825 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	GIMAP2	Q9UG22	337 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	POLL	Q9UGP5	575 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	ERRFI1	Q9UJM3	462 aa	Predicted RBP	2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	GRID1	Q9ULK0	1009 aa		2.96	□□□□□ -1.94
TARDBP-208	ENST00000477447	FPGT	O14772	594 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	RPS6KA5	O75582	802 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	IGLV1-44	P01699	117 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	LHCGR	P22888	699 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ACAT1	P24752	427 aa	Known RBP	2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ALDH3A2	P51648	485 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	VAMP7	P51809	220 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	DLK1	P80370	383 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ZNF273	Q14593	569 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	PSMD6	Q15008	389 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	LCN1P1	Q5VSP4	162 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	OR4A47	Q6IF82	309 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	BHLHB9	Q6PI77	547 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ENPP7	Q6UWV6	458 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	GSG1L	Q6UXU4	331 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	G2E3	Q7L622	706 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ADCK2	Q7Z695	626 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	MARVELD2	Q8N4S9	558 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	RASGEF1A	Q8N9B8	481 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	WDSUB1	Q8N9V3	476 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	GPRC5A	Q8NFJ5	357 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	SPATA3	Q8NHX4	192 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	GMPPA	Q96IJ6	420 aa	Predicted RBP	2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	ART5	Q96L15	291 aa		2.95	□□□□□ -1.94
TARDBP-208	ENST00000477447	SPATA33	Q96N06	139 aa		2.95	□□□□□ -1.94

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